LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism.

Yiying Dou

Tianyuan Liu Bohao Zou Manman He Yongfei Hu Yiying Dou Tianyu Cui Puwen Tan Shaobin Li Shuan Rao Yan Huang Sixi Liu Kaican Cai Dong Wang 0011 LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism. 2023 January 24 Briefings Bioinform. 1 https://doi.org/10.1093/bib/bbac579 db/journals/bib/bib24.html#LiuZHHDCTLRHLCW23

Tianyu Cui Yiying Dou Puwen Tan Zhen Ni Tianyuan Liu Duolin Wang Yan Huang Kaican Cai Xiaoyang Zhao Dong Xu 0002 Hao Lin 0001 Dong Wang 0011 RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation. 333-339 2022 50 Nucleic Acids Res. D1 https://doi.org/10.1093/nar/gkab825 db/journals/nar/nar50.html#CuiDTNLWHCZXLW22

Lin Ning 0002 Tianyu Cui Boyang Zheng Nuo Wang Jiaxin Luo Beilei Yang Mengze Du Jun Cheng Yiying Dou Dong Wang 0011 MNDR v3.0: mammal ncRNA-disease repository with increased coverage and annotation. D160-D164 2021 49 Nucleic Acids Res. Database-Issue https://doi.org/10.1093/nar/gkaa707 https://www.wikidata.org/entity/Q98652733 db/journals/nar/nar49.html#NingCZWLYDCD021

Yanjun Xu Tan Wu Feng Li Qun Dong Jingwen Wang Desi Shang Yingqi Xu Chunlong Zhang Yiying Dou Congxue Hu Haixiu Yang Xuan Zheng Yunpeng Zhang Lihua Wang 0002 Xia Li 0004 Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer. 2153-2166 2020 21 Briefings Bioinform. 6 https://doi.org/10.1093/bib/bbz113 https://www.wikidata.org/entity/Q91622159 db/journals/bib/bib21.html#XuWLDWSXZDHYZZW20

Kaican Cai Jun Cheng Tianyu Cui Qun Dong Mengze Du Manman He Congxue Hu Yongfei Hu Yan Huang Feng Li Shaobin Li Xia Li 0004 Hao Lin 0001 Sixi Liu Tianyuan Liu Jiaxin Luo Zhen Ni Lin Ning 0002 Shuan Rao Desi Shang Puwen Tan Dong Wang 0011 Duolin Wang Jingwen Wang Lihua Wang 0002 Nuo Wang Tan Wu Dong Xu 0002 Yanjun Xu Yingqi Xu Beilei Yang Haixiu Yang Chunlong Zhang Yunpeng Zhang Xiao-Yang ZhaoXiaoyang Zhao Boyang Zheng Xuan Zheng Bohao Zou