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Journal of Biomedical Informatics, Volume 53
Volume 53, February 2015
- Edward H. Shortliffe
:
JBI moves to new publishing models. 1-2
- Vimla L. Patel, Thomas George Kannampallil
Cognitive informatics in biomedicine and healthcare. 3-14
- Gregory F. Cooper, Ricardo Villamarín-Salomón, Fuchiang (Rich) Tsui, Nicholas Millett, Jeremy U. Espino, Michael M. Wagner:
A method for detecting and characterizing outbreaks of infectious disease from clinical reports. 15-26 - Emmanuel S. Adabor, George K. Acquaah-Mensah, Francis T. Oduro:
SAGA: A hybrid search algorithm for Bayesian Network structure learning of transcriptional regulatory networks. 27-35 - Merlijn Sevenster, Jeffrey Bozeman, Andrea Cowhy, William Trost:
A natural language processing pipeline for pairing measurements uniquely across free-text CT reports. 36-48 - Ching-Heng Lin, Nai-Yuan Wu, Der-Ming Liou:
A multi-technique approach to bridge electronic case report form design and data standard adoption. 49-57 - Matthias Zwick:
Automated curation of gene name normalization results using the Konstanz information miner. 58-64 - Cristina Altomare, Raffaella Guglielmann, Marco Riboldi
Optimal marker placement in hadrontherapy: Intelligent optimization strategies with augmented Lagrangian pattern search. 65-72 - Aileen P. Wright, Adam Wright
The use of sequential pattern mining to predict next prescribed medications. 73-80 - Yong Bai, Duc H. Do
Integrating monitor alarms with laboratory test results to enhance patient deterioration prediction. 81-92 - Michael G. Eberhart, Amanda M. Share, Mark Shpaner, Kathleen A. Brady:
Comparison of geographic methods to assess travel patterns of persons diagnosed with HIV in Philadelphia: How close is close enough? 93-99 - Sandra Vosbergen, Johanna M. R. Mulder-Wiggers, Joyca Lacroix, Hareld Kemps
Using personas to tailor educational messages to the preferences of coronary heart disease patients. 100-112 - Yang Chen, Xiang Zhang, Guo-Qiang Zhang
Comparative analysis of a novel disease phenotype network based on clinical manifestations. 113-120 - Andrea Marinoni, Ettore Rizzo, Ivan Limongelli
A kinetic model-based algorithm to classify NGS short reads by their allele origin. 121-127 - Rong Xu
Combining automatic table classification and relationship extraction in extracting anticancer drug-side effect pairs from full-text articles. 128-135 - Anne M. Turner, Megumu Brownstein, Kate Cole, Hilary Karasz, Katrin Kirchhoff:
Modeling workflow to design machine translation applications for public health practice. 136-146 - Xiang Wang, Fei Wang, Jianying Hu, Robert Sorrentino:
Towards actionable risk stratification: A bilinear approach. 147-155 - Bartholomeus C. M. (Benno) Haarman, Rixt F. Riemersma-Van der Lek, Willem A. Nolen, Richard Mendes, Hemmo A. Drexhage, Huibert Burger
Feature-expression heat maps - A new visual method to explore complex associations between two variable sets. 156-161 - Georges De Moor, Mats Sundgren, Dipak Kalra, Andreas Schmidt, Martin Dugas
Using electronic health records for clinical research: The case of the EHR4CR project. 162-173 - Mohammadhiwa Abdekhoda
The effects of organizational contextual factors on physicians' attitude toward adoption of Electronic Medical Records. 174-179 - Nastaran Jafarpour, Masoumeh T. Izadi, Doina Precup, David L. Buckeridge:
Quantifying the determinants of outbreak detection performance through simulation and machine learning. 180-187 - Markus Kreuzthaler
Secondary use of electronic health records for building cohort studies through top-down information extraction. 188-195 - Abeed Sarker
Portable automatic text classification for adverse drug reaction detection via multi-corpus training. 196-207 - Yu-Liang Chi
A chronic disease dietary consultation system using OWL-based ontologies and semantic rules. 208-219 - Anima Singh, Girish N. Nadkarni, Omri Gottesman, Stephen B. Ellis, Erwin P. Bottinger, John V. Guttag:
Incorporating temporal EHR data in predictive models for risk stratification of renal function deterioration. 220-228 - Jiawei Luo, Shiyu Liang:
Prioritization of potential candidate disease genes by topological similarity of protein-protein interaction network and phenotype data. 229-236 - Hiroshi Mamiya, Kevin Schwartzman, Aman Verma
Towards probabilistic decision support in public health practice: Predicting recent transmission of tuberculosis from patient attributes. 237-242 - Christopher J. Vincent
Usability standards meet scenario-based design: Challenges and opportunities. 243-250 - David Martínez
Automatic detection of patients with invasive fungal disease from free-text computed tomography (CT) scans. 251-260 - Smaranda Belciug, Florin Gorunescu
Improving hospital bed occupancy and resource utilization through queuing modeling and evolutionary computation. 261-269 - Stein Olav Skrøvseth, Knut Magne Augestad, Shahram Ebadollahi:
Data-driven approach for assessing utility of medical tests using electronic medical records. 270-276 - Iman Kamkar
Stable feature selection for clinical prediction: Exploiting ICD tree structure using Tree-Lasso. 277-290 - Hélène Blasco, Jerzy Blaszczynski
Comparative analysis of targeted metabolomics: Dominance-based rough set approach versus orthogonal partial least square-discriminant analysis. 291-299 - Antonio Jimeno-Yepes
Knowledge based word-concept model estimation and refinement for biomedical text mining. 300-307 - Jens Meier, Andreas Dietz, Andreas Boehm
Predicting treatment process steps from events. 308-319 - Timothy S. Chang
Sparse modeling of spatial environmental variables associated with asthma. 320-329 - Dominic Furniss
Exploring medical device design and use through layers of Distributed Cognition: How a glucometer is coupled with its context. 330-341 - Faezeh Karimi
Clinical information systems end user satisfaction: The expectations and needs congruencies effects. 342-354 - Dae-Soon Son, DongHyuk Lee, Kyusang Lee, Sin-Ho Jung, TaeJin Ahn, Eunjin Lee, Insuk Sohn, Jongsuk Chung, Woong-Yang Park
Practical approach to determine sample size for building logistic prediction models using high-throughput data. 355-362 - Feng Zhang, Xiao Xiao, Jingcan Hao, Sen Wang, Yan Wen, Xiong Guo:
CPAS: A trans-omics pathway analysis tool for jointly analyzing DNA copy number variations and mRNA expression profiles data. 363-366 - Seonho Kim, Juntae Yoon:
Link-topic model for biomedical abbreviation disambiguation. 367-380 - Jin Cao, Li Zhang, Bangjun Wang, Fanzhang Li, Jiwen Yang:
A fast gene selection method for multi-cancer classification using multiple support vector data description. 381-389
- A. A. Zaidan, B. B. Zaidan
Evaluation and selection of open-source EMR software packages based on integrated AHP and TOPSIS. 390-404 - Ruth E. Soria-Guerra
An overview of bioinformatics tools for epitope prediction: Implications on vaccine development. 405-414
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