ONS Modeling of Diet Concepts: Further Development Required by the Objective Definition of "Western Diet" - Ana Reis-Costa; Francesco Vitali; Agnese Gori; Giovanni Bacci; Carlotta De Filippo; Duccio Cavalieri (Proceedings of the Joint Ontology Workshops 2021 Episode VII: The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems (FOIS 2021), and the 12th International Conference on Biomedical Ontologies (ICBO 2021), Bolzano, Italy, September 11-18, 2021, 2021)

Explaining Diversity in Metagenomic Datasets by Phylogenetic-Based Feature Weighting - Davide Albanese; Carlotta De Filippo; Duccio Cavalieri; Claudio Donati (PLoS Comput. Biol., 2015)

Bioinformatic approaches for functional annotation and pathway inference in metagenomics data - Carlotta De Filippo; Matteo Ramazzotti; Paolo Fontana; Duccio Cavalieri (Briefings Bioinform., 2012)