Bridging abstract dialectical argumentation and Boolean gene regulation. - Azpeitia, Eugenio; Gutiérrez, Stan Muñoz; Rosenblueth, David A.; Zapata, Octavio (CoRR, 2024)

Signaling pathways have an inherent need for noise to acquire information. - Azpeitia, Eugenio; Balanzario, Eugenio P.; Wagner, Andreas (BMC Bioinform., 2020)

A dynamic genetic-hormonal regulatory network model explains multiple cellular behaviors of the root apical meristem of Arabidopsis thaliana. - García-Gómez, Mónica L.; Azpeitia, Eugenio; Álvarez-Buylla, Elena R. (PLoS Comput. Biol., 2017)

A Dynamic Gene Regulatory Network Model That Recovers the Cyclic Behavior of Arabidopsis thaliana Cell Cycle. - Ortiz-Gutiérrez, Elizabeth; García-Cruz, Karla; Azpeitia, Eugenio; Castillo, Aaron; Sánchez, María de la Paz; Álvarez-Buylla, Elena R. (PLoS Comput. Biol., 2015)

Inference of Boolean Networks from Gene Interaction Graphs Using a SAT Solver. - Rosenblueth, David A.; Muñoz, Stalin; Carrillo, Miguel; Azpeitia, Eugenio (2014)

Cell Patterns Emerge from Coupled Chemical and Physical Fields with Cell Proliferation Dynamics: The Arabidopsis thaliana Root as a Study System. - Barrio, Rafael A.; Romero-Arias, José Roberto; Noguez, Marco A.; Azpeitia, Eugenio; Ortiz-Gutiérrez, Elizabeth; Hernández-Hernández, Valeria; Cortes-Poza, Yuriria; Álvarez-Buylla, Elena R. (PLoS Comput. Biol., 2013)

"Antelope": a hybrid-logic model checker for branching-time Boolean GRN analysis. - Arellano, Gustavo; Argil, Julián; Azpeitia, Eugenio; Benítez, Mariana; Carrillo, Miguel; Góngora, Pedro Arturo; Rosenblueth, David A.; Álvarez-Buylla, Elena R. (BMC Bioinform., 2011)

Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche. - Azpeitia, Eugenio; Benítez, Mariana; Vega, Iliusi; Villarreal, Carlos; Álvarez-Buylla, Elena R. (BMC Syst. Biol., 2010)