Bioinformatics tools for the identification of gene clusters that biosynthesize specialized metabolites. - Chavali, Arvind K.; Rhee, Seung Y. (Briefings Bioinform., 2018)

Metabolic network analysis predicts efficacy of FDA-approved drugs targeting the causative agent of a neglected tropical disease. - Chavali, Arvind K.; Blazier, Anna S.; Tlaxca, Jose L.; Jensen, Paul A.; Pearson, Richard D.; Papin, Jason A. (BMC Syst. Biol., 2012)

Proteomic and network analysis characterize stage-specific metabolism in Trypanosoma cruzi. - Roberts, Seth B.; Robichaux, Jennifer L.; Chavali, Arvind K.; Manque, Patricio A.; Lee, Vladimir; Lara, Ana M.; Papin, Jason A.; Buck, Gregory A. (BMC Syst. Biol., 2009)