pycofitness - Evaluating the fitness landscape of RNA and protein sequences. - Pucci, Fabrizio; Zerihun, Mehari B.; Rooman, Marianne; Schug, Alexander (Bioinform., 2024)

Critical review of conformational B-cell epitope prediction methods. - Cia, Gabriel; Pucci, Fabrizio; Rooman, Marianne (Briefings Bioinform., 2023)

Estimating the Vertical Ionization Potential of Single-Stranded DNA Molecules. - Rooman, Marianne; Pucci, Fabrizio (J. Chem. Inf. Model., 2023)

SpikePro: a webserver to predict the fitness of SARS-CoV-2 variants. - Cia, Gabriel; Kwasigroch, Jean Marc; Rooman, Marianne; Pucci, Fabrizio (Bioinform., 2022)

MutaFrame - an interpretative visualization framework for deleteriousness prediction of missense variants in the human exome. - Ancien, François; Pucci, Fabrizio; Vranken, Wim F.; Rooman, Marianne (Bioinform., 2021)

BRANEart: Identify Stability Strength and Weakness Regions in Membrane Proteins. - Basu, Sankar; Assaf, Simon S.; Teheux, Fabian; Rooman, Marianne; Pucci, Fabrizio (Frontiers Bioinform., 2021)

AI challenges for predicting the impact of mutations on protein stability. - Pucci, Fabrizio; Schwersensky, Martin; Rooman, Marianne (CoRR, 2021)

SOLart: a structure-based method to predict protein solubility and aggregation. - Hou, Qingzhen; Kwasigroch, Jean Marc; Rooman, Marianne; Pucci, Fabrizio (Bioinform., 2020)

pydca v1.0: a comprehensive software for direct coupling analysis of RNA and protein sequences. - Zerihun, Mehari B.; Pucci, Fabrizio; Peter, Emanuel K.; Schug, Alexander (Bioinform., 2020)

Quantification of biases in predictions of protein stability changes upon mutations. - Pucci, Fabrizio; Bernaerts, Katrien V.; Kwasigroch, Jean Marc; Rooman, Marianne (Bioinform., 2018)

SCooP: an accurate and fast predictor of protein stability curves as a function of temperature. - Pucci, Fabrizio; Kwasigroch, Jean Marc; Rooman, Marianne (Bioinform., 2017)

Stability Curve Prediction of Homologous Proteins Using Temperature-Dependent Statistical Potentials. - Pucci, Fabrizio; Rooman, Marianne (PLoS Comput. Biol., 2014)