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Stefano Markidis
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2020 – today
- 2025
- [j32]Stefano Markidis, Michela Taufer, Lucio Grandinetti:
Special Collection on Advances in Quantum Computing: Methods, Algorithms, and Systems. Future Gener. Comput. Syst. 163: 107503 (2025) - 2024
- [c88]Pratibha Raghupati Hegde
, Oleksandr Kyriienko
Beyond the Buzz: Strategic Paths for Enabling Useful NISQ Applications. CF 2024 - [c87]Daniel Medeiros
IO-SEA: Storage I/O and Data Management for Exascale Architectures. CF (Companion) 2024 - [c86]Jeremy J. Williams, Daniel Medeiros, Stefan Costea, David Tskhakaya, Franz Poeschel, René Widera, Axel Huebl, Scott Klasky, Norbert Podhorszki, Leon Kos, Ales Podolnik, Jakub Hromadka, Tapish Narwal, Klaus Steiniger, Michael Bussmann, Erwin Laure, Stefano Markidis:
Enabling High- Throughput Parallel I/O in Particle-in-Cell Monte Carlo Simulations with openPMD and Darshan I/O Monitoring. CLUSTER Workshops 2024: 86-95 - [c85]Yifei He, Stefano Markidis:
High-Performance FFT Code Generation via MLIR Linalg Dialect and SIMD Micro-Kernels. CLUSTER 2024: 155-165 - [c84]Niclas Jansson, Martin Karp, Stefano Markidis, Philipp Schlatter:
Neko: A Modern, Portable, and Scalable Framework for Extreme-Scale Computational Fluid Dynamics. CLUSTER Workshops 2024: 156-157 - [c83]Jonah Ekelund, Ricardo Vinuesa, Yuri V. Khotyaintsev, Pierre Henri, Gian Luca Delzanno, Stefano Markidis:
AI in Space for Scientific Missions: Strategies for Minimizing Neural-Network Model Upload. e-Science 2024: 1-10 - [c82]Felix Liu
Krylov Solvers for Interior Point Methods with Applications in Radiation Therapy and Support Vector Machines. ICCS (1) 2024: 63-77 - [c81]Federica Bragone
Time Series Predictions Based on PCA and LSTM Networks: A Framework for Predicting Brownian Rotary Diffusion of Cellulose Nanofibrils. ICCS (1) 2024: 209-223 - [c80]Jeremy J. Williams, Felix Liu, David Tskhakaya, Stefan Costea, Ales Podolnik, Stefano Markidis:
Optimizing BIT1, a Particle-in-Cell Monte Carlo Code, with OpenMP/OpenACC and GPU Acceleration. ICCS (1) 2024: 316-330 - [c79]Stefano Markidis
Brain-Inspired Physics-Informed Neural Networks: Bare-Minimum Neural Architectures for PDE Solvers. ICCS (1) 2024: 331-345 - [c78]Måns Ivar Andersson
Towards Performance Portable Kernels for Computational Fluid Dynamics Using DaCe. ICPP Workshops 2024: 110-111 - [c77]Pratibha Raghupati Hegde
Quantum Physics Informed Neural Networks. ICPP Workshops 2024: 114-115 - [c76]Camille Coti, Yann Pfau-Kempf, Markus Battarbee, Urs Ganse, Sameer Shende, Kevin A. Huck, Jordi Rodriquez, Leo Kotipalo, Jennifer Faj, Jeremy J. Williams, Ivy Peng, Allen D. Malony, Stefano Markidis, Minna Palmroth:
Integration of Modern HPC Performance Tools in Vlasiator for Exascale Analysis and Optimization. IPDPS (Workshops) 2024: 996-1005 - [c75]Måns I. Andersson, Felix Liu, Stefano Markidis:
Anderson Accelerated PMHSS for Complex-Symmetric Linear Systems. PP 2024: 39-52 - [c74]Yi Ju, Dominik Huber, Adalberto Perez, Philipp Ulbl, Stefano Markidis, Philipp Schlatter, Martin Schulz, Martin Schreiber, Erwin Laure:
Dynamic Resource Management for In-Situ Techniques Using MPI-Sessions. EuroMPI 2024: 105-120 - [c73]Stefano Markidis:
What is Quantum Parallelism, Anyhow? ISC 2024: 1-12 - [i67]Steven Wei Der Chien, Kento Sato, Artur Podobas, Niclas Jansson, Stefano Markidis, Michio Honda:
Accelerating Scientific Application through Transparent I/O Interposition. CoRR abs/2401.14576 (2024) - [i66]Stefano Markidis:
From Complexity to Simplicity: Brain-Inspired Modularization of PINN Solvers. CoRR abs/2401.15661 (2024) - [i65]Jeremy J. Williams, Felix Liu, David Tskhakaya, Stefan Costea, Ales Podolnik, Stefano Markidis:
Optimizing BIT1, a Particle-in-Cell Monte Carlo Code, with OpenMP/OpenACC and GPU Acceleration. CoRR abs/2404.10270 (2024) - [i64]Ricardo Vinuesa, Jean Rabault, Hossein Azizpour, Stefan Bauer, Bingni W. Brunton, Arne Elofsson, Elias Jarlebring, Hedvig Kjellström, Stefano Markidis, David Marlevi, Paola Cinnella, Steven L. Brunton:
Opportunities for machine learning in scientific discovery. CoRR abs/2405.04161 (2024) - [i63]Martin Karp, Niclas Jansson, Philipp Schlatter, Stefano Markidis:
Supercomputers as a Continous Medium. CoRR abs/2405.05639 (2024) - [i62]Martin Karp, Estela Suarez, Jan H. Meinke, Måns I. Andersson
Experience and Analysis of Scalable High-Fidelity Computational Fluid Dynamics on Modular Supercomputing Architectures. CoRR abs/2405.05640 (2024) - [i61]Stefano Markidis:
What is Quantum Parallelism, Anyhow? CoRR abs/2405.07222 (2024) - [i60]Jonah Ekelund, Ricardo Vinuesa, Yuri V. Khotyaintsev, Pierre Henri, Gian Luca Delzanno, Stefano Markidis:
AI in Space for Scientific Missions: Strategies for Minimizing Neural-Network Model Upload. CoRR abs/2406.14297 (2024) - [i59]Jeremy J. Williams, Stefan Costea, Allen D. Malony, David Tskhakaya, Leon Kos, Ales Podolnik, Jakub Hromadka, Kevin A. Huck, Erwin Laure, Stefano Markidis:
Understanding the Impact of openPMD on BIT1, a Particle-in-Cell Monte Carlo Code, through Instrumentation, Monitoring, and In-Situ Analysis. CoRR abs/2406.19058 (2024) - [i58]Jeremy J. Williams, Ashish Bhole, Dylan Kierans, Matthias Hoelzl, Ihor Holod, Weikang Tang, David Tskhakaya, Stefan Costea, Leon Kos, Ales Podolnik, Jakub Hromadka, JOREK Team, Erwin Laure, Stefano Markidis:
Understanding Large-Scale Plasma Simulation Challenges for Fusion Energy on Supercomputers. CoRR abs/2407.00394 (2024) - [i57]Yi Ju, Adalberto Perez, Stefano Markidis, Philipp Schlatter, Erwin Laure:
Understanding the Impact of Synchronous, Asynchronous, and Hybrid In-Situ Techniques in Computational Fluid Dynamics Applications. CoRR abs/2407.20717 (2024) - [i56]Yi Ju, Mingshuai Li, Adalberto Perez, Laura Bellentani, Niclas Jansson, Stefano Markidis, Philipp Schlatter, Erwin Laure:
In-Situ Techniques on GPU-Accelerated Data-Intensive Applications. CoRR abs/2407.20731 (2024) - [i55]Jeremy J. Williams, Daniel Medeiros, Ivy Bo Peng, Stefano Markidis:
Characterizing the Performance of the Implicit Massively Parallel Particle-in-Cell iPIC3D Code. CoRR abs/2408.01983 (2024) - [i54]Jeremy J. Williams, Daniel Medeiros, Stefan Costea, David Tskhakaya, Franz Poeschel, René Widera, Axel Huebl, Scott Klasky, Norbert Podhorszki, Leon Kos, Ales Podolnik, Jakub Hromadka, Tapish Narwal, Klaus Steiniger, Michael Bussmann, Erwin Laure, Stefano Markidis:
Enabling High-Throughput Parallel I/O in Particle-in-Cell Monte Carlo Simulations with openPMD and Darshan I/O Monitoring. CoRR abs/2408.02869 (2024) - [i53]Gabin Schieffer, Ruimin Shi, Stefano Markidis, Andreas Herten, Jennifer Faj, Ivy Peng:
Understanding Data Movement in AMD Multi-GPU Systems with Infinity Fabric. CoRR abs/2410.00801 (2024) - [i52]Ivy Peng, Martin Schulz, Utz-Uwe Haus, Craig Prunty, Pedro Marcuello, Emanuele Danovaro, Gabin Schieffer, Jacob Wahlgren, Daniel Araújo de Medeiros, Philipp Friese, Stefano Markidis:
OpenCUBE: Building an Open Source Cloud Blueprint with EPI Systems. CoRR abs/2410.10423 (2024) - 2023
- [j31]Markus Flatken
VESTEC: Visual Exploration and Sampling Toolkit for Extreme Computing. IEEE Access 11: 87805-87834 (2023) - [j30]Stefano Markidis
Programming Quantum Neural Networks on NISQ Systems: An Overview of Technologies and Methodologies. Entropy 25(4): 694 (2023) - [j29]Ayesha Afzal
Making applications faster by asynchronous execution: Slowing down processes or relaxing MPI collectives. Future Gener. Comput. Syst. 148: 472-487 (2023) - [j28]Martin Karp
Large-Scale direct numerical simulations of turbulence using GPUs and modern Fortran. Int. J. High Perform. Comput. Appl. 37(5): 487-502 (2023) - [j27]Cecilia Pagliantini, Gian Luca Delzanno, Stefano Markidis:
Physics-based adaptivity of a spectral method for the Vlasov-Poisson equations based on the asymmetrically-weighted Hermite expansion in velocity space. J. Comput. Phys. 488: 112252 (2023) - [c72]Steven Wei Der Chien
Improving Cloud Storage Network Bandwidth Utilization of Scientific Applications. APNet 2023: 172-173 - [c71]Gilbert Netzer
QHDL: a Low-Level Circuit Description Language for Quantum Computing. CF 2023: 201-204 - [c70]Jennifer Faj
Quantum Computer Simulations at Warp Speed: Assessing the Impact of GPU Acceleration: A Case Study with IBM Qiskit Aer, Nvidia Thrust & cuQuantum. e-Science 2023: 1-10 - [c69]Yi Ju
In-Situ Techniques on GPU-Accelerated Data-Intensive Applications. e-Science 2023: 1-10 - [c68]Jeremy J. Williams, David Tskhakaya, Stefan Costea, Ivy Bo Peng, Marta Garcia-Gasulla, Stefano Markidis:
Leveraging HPC Profiling and Tracing Tools to Understand the Performance of Particle-in-Cell Monte Carlo Simulations. Euro-Par Workshops (1) 2023: 123-134 - [c67]Yifei He, Artur Podobas, Stefano Markidis:
Leveraging MLIR for Loop Vectorization and GPU Porting of FFT Libraries. Euro-Par Workshops (1) 2023: 207-218 - [c66]Ivy Peng, Martin Schulz
OpenCUBE: Building an Open Source Cloud Blueprint with EPI Systems. Euro-Par Workshops 2023: 260-264 - [c65]Gabin Schieffer, Nattawat Pornthisan, Daniel Medeiros, Stefano Markidis, Jacob Wahlgren, Ivy Peng:
Boosting the Performance of Object Tracking with a Half-Precision Particle Filter on GPU. Euro-Par Workshops (1) 2023: 294-305 - [c64]Felix Liu
Parallel Cholesky Factorization for Banded Matrices Using OpenMP Tasks. Euro-Par 2023: 725-739 - [c63]Måns Ivar Andersson
A Case Study on DaCe Portability & Performance for Batched Discrete Fourier Transforms. HPC Asia 2023: 55-63 - [c62]Daniel Araújo de Medeiros
LibCOS: Enabling Converged HPC and Cloud Data Stores with MPI. HPC Asia 2023: 106-116 - [c61]Nattawat Pornthisan, Stefano Markidis:
Fast Electromagnetic Field Pattern Calculation with Fourier Neural Operators. ICCS (2) 2023: 247-255 - [c60]Niclas Jansson
Exploring the Ultimate Regime of Turbulent Rayleigh-Bénard Convection Through Unprecedented Spectral-Element Simulations. SC 2023: 5:1-5:9 - [c59]Martin Karp
Uncertainty Quantification of Reduced-Precision Time Series in Turbulent Channel Flow. SC Workshops 2023: 387-390 - [c58]Stefano Markidis
Enabling Quantum Computer Simulations on AMD GPUs: a HIP Backend for Google's qsim. SC Workshops 2023: 1478-1486 - [i51]Ayesha Afzal, Georg Hager, Stefano Markidis, Gerhard Wellein:
Making Applications Faster by Asynchronous Execution: Slowing Down Processes or Relaxing MPI Collectives. CoRR abs/2302.12164 (2023) - [i50]Felix Liu, Albin Fredriksson, Stefano Markidis:
Parallel Cholesky Factorization for Banded Matrices using OpenMP Tasks. CoRR abs/2305.04635 (2023) - [i49]Gilbert Netzer, Stefano Markidis:
QHDL: a Low-Level Circuit Description Language for Quantum Computing. CoRR abs/2305.09419 (2023) - [i48]Jeremy J. Williams, David Tskhakaya, Stefan Costea, Ivy Bo Peng, Marta Garcia-Gasulla, Stefano Markidis:
Leveraging HPC Profiling & Tracing Tools to Understand the Performance of Particle-in-Cell Monte Carlo Simulations. CoRR abs/2306.16512 (2023) - [i47]Jennifer Faj, Ivy Bo Peng, Jacob Wahlgren, Stefano Markidis:
Quantum Computer Simulations at Warp Speed: Assessing the Impact of GPU Acceleration. CoRR abs/2307.14860 (2023) - [i46]Yifei He, Artur Podobas, Stefano Markidis:
Leveraging MLIR for Loop Vectorization and GPU Porting of FFT Libraries. CoRR abs/2308.00497 (2023) - [i45]Måns I. Andersson
Anderson Accelerated PMHSS for Complex-Symmetric Linear Systems. CoRR abs/2308.00630 (2023) - [i44]Felix Liu, Albin Fredriksson, Stefano Markidis:
Krylov Solvers for Interior Point Methods with Applications in Radiation Therapy. CoRR abs/2308.00637 (2023) - [i43]Gabin Schieffer, Nattawat Pornthisan, Daniel Araújo de Medeiros, Stefano Markidis, Jacob Wahlgren, Ivy Bo Peng:
Boosting the Performance of Object Tracking with a Half-Precision Particle Filter on GPU. CoRR abs/2308.00763 (2023) - 2022
- [j26]Stefano Markidis:
On physics-informed neural networks for quantum computers. Frontiers Appl. Math. Stat. 8 (2022) - [j25]Marco Atzori
In situ visualization of large-scale turbulence simulations in Nek5000 with ParaView Catalyst. J. Supercomput. 78(3): 3605-3620 (2022) - [j24]Felix Liu
A survey of HPC algorithms and frameworks for large-scale gradient-based nonlinear optimization. J. Supercomput. 78(16): 17513-17542 (2022) - [c57]Yi Ju
Understanding the Impact of Synchronous, Asynchronous, and Hybrid In-Situ Techniques in Computational Fluid Dynamics Applications. e-Science 2022: 295-305 - [c56]Yifei He, Artur Podobas, Måns I. Andersson
FFTc: An MLIR Dialect for Developing HPC Fast Fourier Transform Libraries. Euro-Par Workshops 2022: 80-92 - [c55]Jonathan Vincent, Jing Gong, Martin Karp, Adam Peplinski, Niclas Jansson
Strong Scaling of OpenACC enabled Nek5000 on several GPU based HPC systems. HPC Asia 2022: 94-102 - [c54]Martin Karp, Artur Podobas, Tobias Kenter, Niclas Jansson
A High-Fidelity Flow Solver for Unstructured Meshes on Field-Programmable Gate Arrays: Design, Evaluation, and Future Challenges. HPC Asia 2022: 125-136 - [c53]Martin Karp, Niclas Jansson, Artur Podobas, Philipp Schlatter, Stefano Markidis:
Reducing communication in the conjugate gradient method: a case study on high-order finite elements. PASC 2022: 2:1-2:11 - [c52]Steven Wei Der Chien, Artur Podobas, Martin Svedin, Andriy Tkachuk, Salem El Sayed, Pawel Andrzej Herman, Ganesan Umanesan, Sai Narasimhamurthy, Stefano Markidis:
NoaSci: A Numerical Object Array Library for I/O of Scientific Applications on Object Storage. PDP 2022: 172-176 - [c51]Ayesha Afzal
Exploring Techniques for the Analysis of Spontaneous Asynchronicity in MPI-Parallel Applications. PPAM (1) 2022: 155-170 - [c50]Måns I. Andersson
Breaking Down the Parallel Performance of GROMACS, a High-Performance Molecular Dynamics Software. PPAM (1) 2022: 333-345 - [c49]Felix Liu
Distributed Objective Function Evaluation for Optimization of Radiation Therapy Treatment Plans. PPAM (1) 2022: 383-395 - [c48]Nick Brown
Workflows to Driving High-Performance Interactive Supercomputing for Urgent Decision Making. ISC Workshops 2022: 233-244 - [i42]Ayesha Afzal, Georg Hager, Gerhard Wellein, Stefano Markidis:
Exploring Techniques for the Analysis of Spontaneous Asynchronicity in MPI-Parallel Applications. CoRR abs/2205.13963 (2022) - [i41]Nick Brown, Rupert Nash, Gordon Gibb, Evgenij Belikov, Artur Podobas, Wei Der Chien, Stefano Markidis, Markus Flatken, Andreas Gerndt:
Workflows to driving high-performance interactive supercomputing for urgent decision making. CoRR abs/2206.14103 (2022) - [i40]Yifei He, Artur Podobas, Måns I. Andersson
FFTc: An MLIR Dialect for Developing HPC Fast Fourier Transform Libraries. CoRR abs/2207.06803 (2022) - [i39]Martin Karp, Daniele Massaro, Niclas Jansson, Alistair Hart, Jacob Wahlgren, Philipp Schlatter, Stefano Markidis:
Large-Scale Direct Numerical Simulations of Turbulence Using GPUs and Modern Fortran. CoRR abs/2207.07098 (2022) - [i38]Felix Liu, Måns I. Andersson
Distributed Objective Function Evaluation for Optimization of Radiation Therapy Treatment Plans. CoRR abs/2208.11395 (2022) - [i37]Måns I. Andersson
Breaking Down the Parallel Performance of GROMACS, a High-Performance Molecular Dynamics Software. CoRR abs/2208.13658 (2022) - [i36]Cecilia Pagliantini, Gian Luca Delzanno, Stefano Markidis:
Physics-based adaptivity of a spectral method for the Vlasov-Poisson equations based on the asymmetrically-weighted Hermite expansion in velocity space. CoRR abs/2208.14373 (2022) - [i35]Stefano Markidis:
On the Physics-Informed Neural Networks for Quantum Computers. CoRR abs/2209.14754 (2022) - 2021
- [j23]Stefano Markidis:
The Old and the New: Can Physics-Informed Deep-Learning Replace Traditional Linear Solvers? Frontiers Big Data 4: 669097 (2021) - [c47]Xavier Aguilar, Stefano Markidis:
A Deep Learning-Based Particle-in-Cell Method for Plasma Simulations. CLUSTER 2021: 692-697 - [c46]Martin Svedin, Artur Podobas, Steven Wei Der Chien, Stefano Markidis:
Higgs Boson Classification: Brain-inspired BCPNN Learning with StreamBrain. CLUSTER 2021: 705-710 - [c45]Artur Podobas, Martin Svedin, Steven Wei Der Chien
StreamBrain: An HPC Framework for Brain-like Neural Networks on CPUs, GPUs and FPGAs. HEART 2021: 8:1-8:6 - [c44]Felix Liu, Niclas Jansson, Artur Podobas, Albin Fredriksson, Stefano Markidis:
Accelerating Radiation Therapy Dose Calculation with Nvidia GPUs. IPDPS Workshops 2021: 449-458 - [c43]Martin Karp, Artur Podobas, Niclas Jansson
High-Performance Spectral Element Methods on Field-Programmable Gate Arrays : Implementation, Evaluation, and Future Projection. IPDPS 2021: 1077-1086 - [c42]Tim Dykes, Clément Foyer
Mamba: Portable Array-based Abstractions for Heterogeneous High-Performance Systems. P3HPC@SC 2021: 10-21 - [c41]Stefano Markidis, Davide Gadioli, Emanuele Vitali, Gianluca Palermo:
Understanding the I/O Impact on the Performance of High-Throughput Molecular Docking. PDSW@SC 2021: 9-14 - [c40]Nick Brown
Utilising urgent computing to tackle the spread of mosquito-borne diseases. UrgentHPC@SC 2021: 36-44 - [e2]Erwin Laure, Stefano Markidis, Ana Lucia Verbanescu, Jay F. Lofstead:
HPDC '21: The 30th International Symposium on High-Performance Parallel and Distributed Computing, Virtual Event, Sweden, June 21-25, 2021. ACM 2021, ISBN 978-1-4503-8217-5 [contents] - [i34]Stefano Markidis:
Physics-Informed Deep-Learning for Scientific Computing. CoRR abs/2103.09655 (2021) - [i33]Felix Liu, Niclas Jansson, Artur Podobas, Albin Fredriksson, Stefano Markidis:
Accelerating Radiation Therapy Dose Calculation with Nvidia GPUs. CoRR abs/2103.09683 (2021) - [i32]Artur Podobas, Martin Svedin, Steven Wei Der Chien, Ivy Bo Peng, Naresh Balaji Ravichandran, Pawel Andrzej Herman, Anders Lansner, Stefano Markidis:
StreamBrain: An HPC Framework for Brain-like Neural Networks on CPUs, GPUs and FPGAs. CoRR abs/2106.05373 (2021) - [i31]Niclas Jansson, Martin Karp, Artur Podobas, Stefano Markidis, Philipp Schlatter:
Neko: A Modern, Portable, and Scalable Framework for High-Fidelity Computational Fluid Dynamics. CoRR abs/2107.01243 (2021) - [i30]Xavier Aguilar, Stefano Markidis:
A Deep Learning-Based Particle-in-Cell Method for Plasma Simulations. CoRR abs/2107.02232 (2021) - [i29]Martin Svedin, Artur Podobas, Steven Wei Der Chien, Stefano Markidis:
Higgs Boson Classification: Brain-inspired BCPNN Learning with StreamBrain. CoRR abs/2107.06676 (2021) - [i28]Martin Karp, Artur Podobas, Tobias Kenter, Niclas Jansson, Christian Plessl, Philipp Schlatter, Stefano Markidis:
A High-Fidelity Flow Solver for Unstructured Meshes on Field-Programmable Gate Arrays. CoRR abs/2108.12188 (2021) - [i27]Jonathan Vincent, Jing Gong, Martin Karp, Adam Peplinski, Niclas Jansson, Artur Podobas, Andreas Jocksch, Jie Yao, Fazle Hussain, Stefano Markidis, Matts Karlsson, Dirk Pleiter, Erwin Laure, Philipp Schlatter:
Strong Scaling of OpenACC enabled Nek5000 on several GPU based HPC systems. CoRR abs/2109.03592 (2021) - [i26]Nick Brown, Rupert Nash, Piero Poletti, Giorgio Guzzetta, Mattia Manica, Agnese Zardini, Markus Flatken, Jules Vidal, Charles Gueunet, Evgenij Belikov, Julien Tierny, Artur Podobas, Wei Der Chien, Stefano Markidis, Andreas Gerndt:
Utilising urgent computing to tackle the spread of mosquito-borne diseases. CoRR abs/2111.05654 (2021) - [i25]Natarajan Arul Murugan, Artur Podobas, Davide Gadioli, Emanuele Vitali, Gianluca Palermo, Stefano Markidis:
A Review on Parallel Virtual Screening Softwares for High Performance Computers. CoRR abs/2112.00116 (2021) - 2020
- [j22]Fearghal O'Donncha
AllScale toolchain pilot applications: PDE based solvers using a parallel development environment. Comput. Phys. Commun. 251: 107089 (2020) - [c39]Steven Wei Der Chien
tf-Darshan: Understanding Fine-grained I/O Performance in Machine Learning Workloads. CLUSTER 2020: 359-370 - [c38]Steven Wei Der Chien
sputniPIC: An Implicit Particle-in-Cell Code for Multi-GPU Systems. SBAC-PAD 2020: 149-156 - [c37]Stefano Markidis, Ivy Bo Peng
Automatic Particle Trajectory Classification in Plasma Simulations. MLHPC/AI4S@SC 2020: 64-71 - [i24]Martin Karp, Niclas Jansson, Artur Podobas, Philipp Schlatter, Stefano Markidis:
Optimization of Tensor-product Operations in Nekbone on GPUs. CoRR abs/2005.13425 (2020) - [i23]Steven Wei Der Chien, Artur Podobas, Ivy Bo Peng, Stefano Markidis:
tf-Darshan: Understanding Fine-grained I/O Performance in Machine Learning Workloads. CoRR abs/2008.04395 (2020) - [i22]Steven Wei Der Chien, Jonas Nylund, Gabriel Bengtsson, Ivy Bo Peng, Artur Podobas, Stefano Markidis:
sputniPIC: an Implicit Particle-in-Cell Code for Multi-GPU Systems. CoRR abs/2008.04397 (2020) - [i21]Stefano Markidis, Ivy Bo Peng, Artur Podobas, Itthinat Jongsuebchoke, Gabriel Bengtsson, Pawel Andrzej Herman:
Automatic Particle Trajectory Classification in Plasma Simulations. CoRR abs/2010.05348 (2020) - [i20]Martin Karp, Artur Podobas, Niclas Jansson, Tobias Kenter, Christian Plessl, Philipp Schlatter, Stefano Markidis:
High-Performance Spectral Element Methods on Field-Programmable Gate Arrays. CoRR abs/2010.13463 (2020)
2010 – 2019
- 2019
- [j21]Marcus Wallden, Stefano Markidis, Masao Okita, Fumihiko Ino:
Memory Efficient Load Balancing for Distributed Large-Scale Volume Rendering Using a Two-Layered Group Structure. IEICE Trans. Inf. Syst. 102-D(12): 2306-2316 (2019) - [j20]Christian Simmendinger
Interoperability strategies for GASPI and MPI in large-scale scientific applications. Int. J. High Perform. Comput. Appl. 33(3) (2019) - [j19]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Stefano Markidis, Sergio Rivas-Gomez, Ivy Bo Peng
SAGE: Percipient Storage for Exascale Data Centric Computing. Parallel Comput. 83: 22-33 (2019) - [c36]Ivy Bo Peng
Analyzing the suitability of contemporary 3D-stacked PIM architectures for HPC scientific applications. CF 2019: 256-262 - [c35]Sergio Rivas-Gomez, Alessandro Fanfarillo, Sébastien Valat, Christophe Laferriere, Philippe Couvée, Sai Narasimhamurthy, Stefano Markidis:
uMMAP-IO: User-Level Memory-Mapped I/O for HPC. HiPC 2019: 363-372 - [c34]Chaitanya Prasad Sishtla
Multi-GPU Acceleration of the iPIC3D Implicit Particle-in-Cell Code. ICCS (5) 2019: 612-618 - [c33]Steven Wei Der Chien
TensorFlow Doing HPC. IPDPS Workshops 2019: 509-518 - [c32]Steven Wei Der Chien
Posit NPB: Assessing the Precision Improvement in HPC Scientific Applications. PPAM (1) 2019: 301-310 - [c31]Sergio Rivas-Gomez, Alessandro Fanfarillo
Persistent coarrays: integrating MPI storage windows in coarray fortran. EuroMPI 2019: 3:1-3:8 - [c30]Steven Wei Der Chien
Performance Evaluation of Advanced Features in CUDA Unified Memory. MCHPC@SC 2019: 50-57 - [i19]Steven Wei Der Chien, Stefano Markidis, Vyacheslav Olshevsky, Yaroslav Bulatov, Erwin Laure, Jeffrey S. Vetter:
TensorFlow Doing HPC. CoRR abs/1903.04364 (2019) - [i18]Chaitanya Prasad Sishtla, Steven Wei Der Chien, Vyacheslav Olshevsky, Erwin Laure, Stefano Markidis:
Multi-GPU Acceleration of the iPIC3D Implicit Particle-in-Cell Code. CoRR abs/1904.03684 (2019) - [i17]Steven Wei Der Chien, Ivy Bo Peng, Stefano Markidis:
Posit NPB: Assessing the Precision Improvement in HPC Scientific Applications. CoRR abs/1907.05917 (2019) - [i16]Vyacheslav Olshevsky, Yuri V. Khotyaintsev
Automated classification of plasma regions using 3D particle energy distribution. CoRR abs/1908.05715 (2019) - [i15]Steven Wei Der Chien, Ivy Bo Peng, Stefano Markidis:
Performance Evaluation of Advanced Features in CUDA Unified Memory. CoRR abs/1910.09598 (2019) - 2018
- [j18]Ivy Bo Peng
Characterizing the performance benefit of hybrid memory system for HPC applications. Parallel Comput. 76: 57-69 (2018) - [j17]Sergio Rivas-Gomez, Roberto Gioiosa, Ivy Bo Peng
MPI windows on storage for HPC applications. Parallel Comput. 77: 38-56 (2018) - [j16]Peter Thoman, Kiril Dichev
A taxonomy of task-based parallel programming technologies for high-performance computing. J. Supercomput. 74(4): 1422-1434 (2018) - [c29]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Steven Wei Der Chien
The SAGE project: a storage centric approach for exascale computing: invited paper. CF 2018: 287-292 - [c28]Sergio Rivas-Gomez, Stefano Markidis, Erwin Laure, Keeran Brabazon, Oliver Perks, Sai Narasimhamurthy:
Decoupled Strategy for Imbalanced Workloads in MapReduce Frameworks. HPCC/SmartCity/DSS 2018: 921-927 - [c27]Stefano Markidis, Steven Wei Der Chien
NVIDIA Tensor Core Programmability, Performance & Precision. IPDPS Workshops 2018: 522-531 - [c26]Sergio Rivas-Gomez, Antonio J. Peña
Exploring the Vision Processing Unit as Co-Processor for Inference. IPDPS Workshops 2018: 589-598 - [c25]Muhammed Abdullah Al Ahad, Christian Simmendinger
Efficient Algorithms for Collective Operations with Notified Communication in Shared Windows. PAW-ATM@SC 2018: 1-10 - [c24]Steven Wei Der Chien
Characterizing Deep-Learning I/O Workloads in TensorFlow. PDSW-DISCS@SC 2018: 54-63 - [c23]Steven Wei Der Chien
Exploring Scientific Application Performance Using Large Scale Object Storage. ISC Workshops 2018: 117-130 - [i14]Stefano Markidis, Steven Wei Der Chien, Erwin Laure, Ivy Bo Peng, Jeffrey S. Vetter:
NVIDIA Tensor Core Programmability, Performance & Precision. CoRR abs/1803.04014 (2018) - [i13]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Stefano Markidis, Sergio Rivas-Gomez, Ivy Bo Peng, Erwin Laure, Dirk Pleiter, Shaun De Witt:
SAGE: Percipient Storage for Exascale Data Centric Computing. CoRR abs/1805.00556 (2018) - [i12]Steven Wei Der Chien, Stefano Markidis, Rami Karim, Erwin Laure, Sai Narasimhamurthy:
Exploring Scientific Application Performance Using Large Scale Object Storage. CoRR abs/1807.02562 (2018) - [i11]Sai Narasimhamurthy, Nikita Danilov, Sining Wu, Ganesan Umanesan, Steven Wei Der Chien, Sergio Rivas-Gomez, Ivy Bo Peng, Erwin Laure, Shaun De Witt, Dirk Pleiter, Stefano Markidis:
The SAGE Project: a Storage Centric Approach for Exascale Computing. CoRR abs/1807.03632 (2018) - [i10]Steven Wei Der Chien, Stefano Markidis, Chaitanya Prasad Sishtla, Luís Santos, Pawel Andrzej Herman, Sai Narasimhamurthy, Erwin Laure:
Characterizing Deep-Learning I/O Workloads in TensorFlow. CoRR abs/1810.03035 (2018) - [i9]Sergio Rivas-Gomez, Roberto Gioiosa, Ivy Bo Peng, Gokcen Kestor, Sai Narasimhamurthy, Erwin Laure, Stefano Markidis:
MPI Windows on Storage for HPC Applications. CoRR abs/1810.04110 (2018) - [i8]Sergio Rivas-Gomez, Sai Narasimhamurthy, Keeran Brabazon, Oliver Perks, Erwin Laure, Stefano Markidis:
Decoupled Strategy for Imbalanced Workloads in MapReduce Frameworks. CoRR abs/1810.04146 (2018) - [i7]Sergio Rivas-Gomez, Antonio J. Peña, David Moloney, Erwin Laure, Stefano Markidis:
Exploring the Vision Processing Unit as Co-processor for Inference. CoRR abs/1810.04150 (2018) - 2017
- [j15]Maria Elena Innocenti
Progress towards physics-based space weather forecasting with exascale computing. Adv. Eng. Softw. 111: 3-17 (2017) - [c22]Sergio Rivas-Gomez, Stefano Markidis, Ivy Bo Peng
Extending Message Passing Interface Windows to Storage. CCGrid 2017: 727-730 - [c21]Ivy Bo Peng
Preparing HPC Applications for the Exascale Era: A Decoupling Strategy. ICPP 2017: 1-10 - [c20]Ivy Bo Peng
Exploring the Performance Benefit of Hybrid Memory System on HPC Environments. IPDPS Workshops 2017: 683-692 - [c19]Ivy Bo Peng
RTHMS: a tool for data placement on hybrid memory system. ISMM 2017: 82-91 - [c18]Peter Thoman, Khalid Hasanov, Kiril Dichev, Roman Iakymchuk
A Taxonomy of Task-Based Technologies for High-Performance Computing. PPAM (2) 2017: 264-274 - [c17]Dana Akhmetova, Luis Cebamanos
Interoperability of GASPI and MPI in Large Scale Scientific Applications. PPAM (2) 2017: 277-287 - [c16]Sergio Rivas-Gomez, Roberto Gioiosa, Ivy Bo Peng
MPI windows on storage for HPC applications. EuroMPI/USA 2017: 15:1-15:11 - [i6]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Exploring Application Performance on Emerging Hybrid-Memory Supercomputers. CoRR abs/1704.08239 (2017) - [i5]Ivy Bo Peng, Stefano Markidis, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Idle Period Propagation in Message-Passing Applications. CoRR abs/1704.08244 (2017) - [i4]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Erwin Laure, Stefano Markidis:
Exploring the Performance Benefit of Hybrid Memory System on HPC Environments. CoRR abs/1704.08273 (2017) - [i3]Sergio Rivas-Gomez, Stefano Markidis, Ivy Bo Peng, Erwin Laure, Gokcen Kestor, Roberto Gioiosa:
Extending Message Passing Interface Windows to Storage. CoRR abs/1704.08492 (2017) - [i2]Ivy Bo Peng, Roberto Gioiosa, Gokcen Kestor, Erwin Laure, Stefano Markidis:
Preparing HPC Applications for the Exascale Era: A Decoupling Strategy. CoRR abs/1708.01304 (2017) - [i1]Ivy Bo Peng, Stefano Markidis, Roberto Gioiosa, Gokcen Kestor, Erwin Laure:
MPI Streams for HPC Applications. CoRR abs/1708.01306 (2017) - 2016
- [j14]Maria Elena Innocenti
Momentum conservation in Multi-Level Multi-Domain (MLMD) simulations. J. Comput. Phys. 312: 14-18 (2016) - [j13]Gianmarco Manzini, Gian Luca Delzanno, Juris Vencels, Stefano Markidis:
A Legendre-Fourier spectral method with exact conservation laws for the Vlasov-Poisson system. J. Comput. Phys. 317: 82-107 (2016) - [j12]Jing Gong, Stefano Markidis, Erwin Laure, Matthew Otten
Nekbone performance on GPUs with OpenACC and CUDA Fortran implementations. J. Supercomput. 72(11): 4160-4180 (2016) - [c15]Ivy Bo Peng
Exploring Application Performance on Emerging Hybrid-Memory Supercomputers. HPCC/SmartCity/DSS 2016: 473-480 - [c14]Ivy Bo Peng
Idle Period Propagation in Message-Passing Applications. HPCC/SmartCity/DSS 2016: 937-944 - [c13]Stefano Markidis, Ivy Bo Peng
A Performance Characterization of Streaming Computing on Supercomputers. ICCS 2016: 98-107 - [c12]Stefano Markidis, Ivy Bo Peng
The EPiGRAM Project: Preparing Parallel Programming Models for Exascale. ISC Workshops 2016: 56-68 - 2015
- [j11]A. Vapirev, Jan Deca, Giovanni Lapenta
Initial results on computational performance of Intel many integrated core, sandy bridge, and graphical processing unit architectures: implementation of a 1D c++/OpenMP electrostatic particle-in-cell code. Concurr. Comput. Pract. Exp. 27(3): 581-593 (2015) - [j10]Maria Elena Innocenti
Introduction of temporal sub-stepping in the Multi-Level Multi-Domain semi-implicit Particle-In-Cell code Parsek2D-MLMD. Comput. Phys. Commun. 189: 47-59 (2015) - [j9]Stefano Markidis, Jing Gong, Michael Schliephake, Erwin Laure, Alistair Hart, David Henty, Katherine Heisey, Paul F. Fischer:
OpenACC acceleration of the Nek5000 spectral element code. Int. J. High Perform. Comput. Appl. 29(3): 311-319 (2015) - [c11]Ivy Bo Peng
The Cost of Synchronizing Imbalanced Processes in Message Passing Systems. CLUSTER 2015: 408-417 - [c10]Dana Akhmetova, Gokcen Kestor
On the Application Task Granularity and the Interplay with the Scheduling Overhead in Many-Core Shared Memory Systems. CLUSTER 2015: 428-437 - [c9]Ilya Ivanov, Jing Gong, Dana Akhmetova, Ivy Bo Peng
Evaluation of Parallel Communication Models in Nekbone, a Nek5000 Mini-Application. CLUSTER 2015: 760-767 - [c8]Juris Vencels, Gian Luca Delzanno
Spectral Solver for Multi-scale Plasma Physics Simulations with Dynamically Adaptive Number of Moments. ICCS 2015: 1148-1157 - [c7]Ivy Bo Peng
The Formation of a Magnetosphere with Implicit Particle-in-Cell Simulations. ICCS 2015: 1178-1187 - [c6]Ivy Bo Peng
A data streaming model in MPI. ExaMPI@SC 2015: 2:1-2:10 - [e1]Stefano Markidis, Erwin Laure:
Solving Software Challenges for Exascale - International Conference on Exascale Applications and Software, EASC 2014, Stockholm, Sweden, April 2-3, 2014, Revised Selected Papers. Lecture Notes in Computer Science 8759, Springer 2015, ISBN 978-3-319-15975-1 [contents] - 2014
- [j8]Lars K. S. Daldorff, Gábor Tóth, Tamas I. Gombosi
Two-way coupling of a global Hall magnetohydrodynamics model with a local implicit particle-in-cell model. J. Comput. Phys. 268: 236-254 (2014) - [j7]Stefano Markidis, Pierre Henri
The Fluid-Kinetic Particle-in-Cell method for plasma simulations. J. Comput. Phys. 271: 415-429 (2014) - [j6]A. Beck, Maria Elena Innocenti
Multi-level multi-domain algorithm implementation for two-dimensional multiscale particle in cell simulations. J. Comput. Phys. 271: 430-443 (2014) - [c5]Jing Gong, Stefano Markidis, Michael Schliephake, Erwin Laure, Dan S. Henningson, Philipp Schlatter
Nek5000 with OpenACC. EASC 2014: 57-68 - 2013
- [j5]Giovanni Lapenta
Space Weather Prediction and Exascale Computing. Comput. Sci. Eng. 15(5): 68-76 (2013) - [j4]Maria Elena Innocenti
A Multi Level Multi Domain Method for Particle In Cell plasma simulations. J. Comput. Phys. 238: 115-140 (2013) - [c4]Pawan Kumar, Stefano Markidis, Giovanni Lapenta
High Performance Solvers for Implicit Particle in Cell Simulation. ICCS 2013: 2251-2258 - 2011
- [j3]Stefano Markidis, Giovanni Lapenta
The energy conserving particle-in-cell method. J. Comput. Phys. 230(18): 7037-7052 (2011) - 2010
- [j2]Stefano Markidis, Giovanni Lapenta
Multi-scale simulations of plasma with iPIC3D. Math. Comput. Simul. 80(7): 1509-1519 (2010) - [c3]Stefano Markidis, Giovanni Lapenta
Development and performance analysis of a UPC Particle-in-Cell code. PGAS 2010: 10
2000 – 2009
- 2005
- [j1]Stefano Markidis, Giovanni Lapenta
Implementation and performance of a particle-in-cell code written in Java. Concurr. Pract. Exp. 17(7-8): 821-837 (2005) - [c2]Giovanni Lapenta, Stefano Markidis:
Plug and Play Approach to Validation of Particle-Based Algorithms. International Conference on Computational Science (3) 2005: 88-95 - 2002
- [c1]Stefano Markidis, Giovanni Lapenta, W. B. VanderHeyden:
Parsek: object oriented particle in cell. implementation and performance issues. Java Grande 2002: 141-147
Coauthor Index
Måns I. Andersson
aka: Måns Ivar Andersson
aka: Måns Ivar Andersson
Steven Wei Der Chien
aka: Wei Der Chien
aka: Wei Der Chien
[c86] [c74] [i59] [i58] [i57] [i56] [i54] [c69] [c60] [j25] [c57] [c55] [e2] [i27] [j22] [j20] [j19] [c34] [c33] [i19] [i18] [j18] [j17] [j16] [c29] [c28] [c27] [c26] [c25] [c24] [c23] [i14] [i13] [i12] [i11] [i10] [i9] [i8] [i7] [c22] [c21] [c20] [c19] [c18] [c17] [c16] [i6] [i5] [i4] [i3] [i2] [i1] [j12] [c15] [c14] [c13] [c12] [j9] [c11] [c10] [c9] [c8] [c7] [c6] [e1] [j7] [c5]
Ivy Bo Peng
aka: Ivy Peng
aka: Ivy Peng
[c88] [c76] [i55] [i53] [i52] [c70] [c68] [c66] [c65] [c62] [i48] [i47] [i43] [c45] [i32] [c39] [c38] [c37] [i23] [i22] [i21] [j19] [c36] [c32] [c30] [i17] [i15] [j18] [j17] [c29] [c27] [i14] [i13] [i11] [i9] [c22] [c21] [c20] [c19] [c16] [i6] [i5] [i4] [i3] [i2] [i1] [c15] [c14] [c13] [c12] [c11] [c9] [c8] [c7] [c6]
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