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Karsten Suhre
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- affiliation: Weill Cornell Medicine, Qatar
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2020 – today
- 2022
- [j23]Siyu Han, Jialing Huang, Francesco Foppiano, Cornelia Prehn
, Jerzy Adamski, Karsten Suhre, Ying Li, Giuseppe Matullo
TIGER: technical variation elimination for metabolomics data using ensemble learning architecture. Briefings Bioinform. 23(2) (2022) - [j22]Mustafa Buyukozkan, Karsten Suhre, Jan Krumsiek
SGI: automatic clinical subgroup identification in omics datasets. Bioinform. 38(2): 573-576 (2022) - [j21]Kelsey Chetnik, Elisa Benedetti, Daniel P. Gomari, Annalise Schweickart, Richa Batra, Mustafa Buyukozkan, Zeyu Wang, Matthias Arnold
maplet: an extensible R toolbox for modular and reproducible metabolomics pipelines. Bioinform. 38(4): 1168-1170 (2022) - 2021
- [j20]Heike Deutelmoser
Robust Huber-LASSO for improved prediction of protein, metabolite and gene expression levels relying on individual genotype data. Briefings Bioinform. 22(4) (2021)
2010 – 2019
- 2019
- [j19]Kieu Trinh Do, David J. N. P. Rasp
MoDentify: phenotype-driven module identification in metabolomics networks at different resolutions. Bioinform. 35(3): 532-534 (2019) - 2018
- [j18]Benjamin B. Sun, Joseph C. Maranville
Genomic atlas of the human plasma proteome. Nat. 558(7708): 73-79 (2018) - 2017
- [j17]Sophie Molnos
pulver: an R package for parallel ultra-rapid p-value computation for linear regression interaction terms. BMC Bioinform. 18(1): 429:1-429:8 (2017) - 2016
- [j16]Gaurav Thareja
A graph based method for depicting population characteristics using Genome Wide Data. J. Comput. Sci. 15: 11-17 (2016) - 2015
- [j15]Matthias Arnold
SNiPA: an interactive, genetic variant-centered annotation browser. Bioinform. 31(8): 1334-1336 (2015) - 2014
- [j14]Simone Wahl, Nora Fenske, Sonja Zeilinger
On the potential of models for location and scale for genome-wide DNA methylation data. BMC Bioinform. 15: 232 (2014) - 2013
- [c3]Zeinab Atieh, Karsten Suhre
MetFlexo: An Automated Simulation of Realistic H1-NMR Spectra. ICCS 2013: 1382-1391 - 2012
- [j13]Ann-Kristin Petersen, Jan Krumsiek, Brigitte Wägele, Fabian J. Theis
On the hypothesis-free testing of metabolite ratios in genome-wide and metabolome-wide association studies. BMC Bioinform. 13: 120 (2012) - 2011
- [j12]Jan Krumsiek, Karsten Suhre
Gaussian graphical modeling reconstructs pathway reactions from high-throughput metabolomics data. BMC Syst. Biol. 5: 21 (2011) - [j11]Hans-Werner Mewes
MIPS: curated databases and comprehensive secondary data resources in 2010. Nucleic Acids Res. 39(Database-Issue): 220-224 (2011)
2000 – 2009
- 2008
- [j10]Karsten Suhre
MassTRIX: mass translator into pathways. Nucleic Acids Res. 36(Web-Server-Issue): 481-484 (2008) - 2006
- [j9]Ghislain Bidaut
Determination of strongly overlapping signaling activity from microarray data. BMC Bioinform. 7: 99 (2006) - [j8]Stéphane Betzi, Karsten Suhre
GFscore: A General Nonlinear Consensus Scoring Function for High-Throughput Docking. J. Chem. Inf. Model. 46(4): 1704-1712 (2006) - 2005
- [j7]François Enault, Karsten Suhre
Phydbac "Gene Function Predictor" : a gene annotation tool based on genomic context analysis. BMC Bioinform. 6: 247 (2005) - 2004
- [j6]Karsten Suhre
FusionDB: a database for in-depth analysis of prokaryotic gene fusion events. Nucleic Acids Res. 32(Database-Issue): 273-276 (2004) - [j5]Olivier Poirot
3DCoffee@igs: a web server for combining sequences and structures into a multiple sequence alignment. Nucleic Acids Res. 32(Web-Server-Issue): 37-40 (2004) - [j4]François Enault, Karsten Suhre
Phydbac2: improved inference of gene function using interactive phylogenomic profiling and chromosomal location analysis. Nucleic Acids Res. 32(Web-Server-Issue): 336-339 (2004) - [j3]Jean-Baptiste Claude
CaspR: a web server for automated molecular replacement using homology modelling. Nucleic Acids Res. 32(Web-Server-Issue): 606-609 (2004) - [j2]Karsten Suhre
ElNémo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Res. 32(Web-Server-Issue): 610-614 (2004) - 2003
- [j1]François Enault, Karsten Suhre
Phydbac (phylogenomic display of bacterial genes): an interactive resource for the annotation of bacterial genomes. Nucleic Acids Res. 31(13): 3720-3722 (2003) - [c2]Ghislain Bidaut, Karsten Suhre
Analysis of Phylogenetic Profiles Using Bayesian Decomposition. CSB 2003: 480-481 - [c1]François Enault, Karsten Suhre, Chantal Abergel, Olivier Poirot, Jean-Michel Claverie:
Annotation of bacterial genomes using improved phylogenomic profiles. ISMB (Supplement of Bioinformatics) 2003: 105-107
Coauthor Index
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