default search action
Thomas O. Metz
Person information
- affiliation: Pacific Northwest National Laboratory, Biological Sciences Division, Richland, WA, USA
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
- [j18]Marjolein T. Oostrom
, Sean M. Colby
DEIMoS GUI: An Open-Source User Interface for a High-Dimensional Mass Spectrometry Data Processing Tool. J. Chem. Inf. Model. 64(5): 1419-1424 (2024) - 2022
- [j17]Yasemin Yesiltepe, Niranjan Govind, Thomas O. Metz, Ryan S. Renslow
An initial investigation of accuracy required for the identification of small molecules in complex samples using quantum chemical calculated NMR chemical shifts. J. Cheminformatics 14(1): 64 (2022) - [j16]David S. Wishart
BioTransformer 3.0 - a web server for accurately predicting metabolic transformation products. Nucleic Acids Res. 50(W1): 115-123 (2022) - [j15]Fei Wang, Dana Allen, Siyang Tian, Eponine Oler, Vasuk Gautam, Russell Greiner, Thomas O. Metz, David S. Wishart
CFM-ID 4.0 - a web server for accurate MS-based metabolite identification. Nucleic Acids Res. 50(W1): 165-174 (2022) - 2021
- [j14]Joon-Yong Lee
AutoCCS: automated collision cross-section calculation software for ion mobility spectrometry-mass spectrometry. Bioinform. 37(22): 4193-4201 (2021) - [j13]Jamie R. Nuñez, Monee Y. McGrady, Yasemin Yesiltepe, Ryan S. Renslow
Correction to "Chespa: Streamlining Expansive Chemical Space Evaluation of Molecular Sets". J. Chem. Inf. Model. 61(5): 2509-2510 (2021) - [j12]Madison R. Blumer
Mass Spectrometry Adduct Calculator. J. Chem. Inf. Model. 61(12): 5721-5725 (2021) - [i2]Felicity F. Nielson, Sean M. Colby, Ryan S. Renslow, Thomas O. Metz:
Similarity Downselection: A Python implementation of a heuristic search algorithm for finding the set of the n most dissimilar items with an application in conformer sampling. CoRR abs/2105.02991 (2021) - [i1]Yasemin Yesiltepe, Ryan S. Renslow, Thomas O. Metz:
SPECTRe: Substructure Processing, Enumeration, and Comparison Tool Resource: An efficient tool to encode all substructures of molecules represented in SMILES. CoRR abs/2111.03227 (2021) - 2020
- [j11]Jamie R. Nuñez, Monee Y. McGrady, Yasemin Yesiltepe, Ryan S. Renslow
Chespa: Streamlining Expansive Chemical Space Evaluation of Molecular Sets. J. Chem. Inf. Model. 60(12): 6251-6257 (2020)
2010 – 2019
- 2019
- [j10]Jamie R. Nuñez, Sean M. Colby, Dennis G. Thomas
Evaluation of In Silico Multifeature Libraries for Providing Evidence for the Presence of Small Molecules in Synthetic Blinded Samples. J. Chem. Inf. Model. 59(9): 4052-4060 (2019) - 2018
- [j9]Yasemin Yesiltepe, Jamie R. Nuñez, Sean M. Colby, Dennis G. Thomas, Mark I. Borkum, Patrick Reardon
An automated framework for NMR chemical shift calculations of small organic molecules. J. Cheminformatics 10(1): 52:1-52:16 (2018) - 2017
- [j8]Jennifer E. Kyle, Kevin L. Crowell, Cameron P. Casey
LIQUID: an-open source software for identifying lipids in LC-MS/MS-based lipidomics data. Bioinform. 33(11): 1744-1746 (2017) - [j7]Jian Ma, Cameron P. Casey
PIXiE: an algorithm for automated ion mobility arrival time extraction and collision cross section calculation using global data association. Bioinform. 33(17): 2715-2722 (2017) - 2016
- [c2]Jean-Philippe F. Gourdine, Thomas O. Metz, David Koeller, Matthew H. Brush, Melissa A. Haendel:
Building a Molecular Glyco-phenotype Ontology to Decipher Undiagnosed Diseases. ICBO/BioCreative 2016 - 2013
- [j6]Brian J. Schmidt
GIM3E: condition-specific models of cellular metabolism developed from metabolomics and expression data. Bioinform. 29(22): 2900-2908 (2013) - [j5]Brian L. LaMarche, Kevin L. Crowell, Navdeep Jaitly, Vladislav A. Petyuk
MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis. BMC Bioinform. 14: 49 (2013) - [j4]Nicolas Tchitchek, Amie J. Eisfeld
Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice. BMC Syst. Biol. 7: 69 (2013) - 2012
- [j3]Lars J. Kangas, Thomas O. Metz
In silico identification software (ISIS): a machine learning approach to tandem mass spectral identification of lipids. Bioinform. 28(13): 1705-1713 (2012) - 2011
- [j2]Melissa M. Matzke, Katrina M. Waters
Improved quality control processing of peptide-centric LC-MS proteomics data. Bioinform. 27(20): 2866-2872 (2011) - [c1]Brian T. Schrom, Lars J. Kangas, Bojana Ginovska-Pangovska, Thomas O. Metz, John H. Miller:
Charge Prediction of Lipid Fragments in Mass Spectrometry. ICMLA (2) 2011: 186-188
2000 – 2009
- 2009
- [j1]Yuliya V. Karpievitch, Jeff Stanley, Thomas Taverner, Jianhua Huang, Joshua N. Adkins, Charles Ansong, Fred Heffron, Thomas O. Metz
A statistical framework for protein quantitation in bottom-up MS-based proteomics. Bioinform. 25(16): 2028-2034 (2009)
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 22:07 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by: