Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes - Luca Renders; Lore Depuydt; Sven Rahmann; Jan Fostier (J. Comput. Biol., 2024)

Faster Maximal Exact Matches with Lazy LCP Evaluation - Adrián Goga; Lore Depuydt; Nathaniel K. Brown; Jan Fostier; Travis Gagie; Gonzalo Navarro (Data Compression Conference, DCC 2024, Snowbird, UT, USA, March 19-22, 2024, 2024)

Automated Design of Efficient Search Schemes for Lossless Approximate Pattern Matching - Luca Renders; Lore Depuydt; Sven Rahmann; Jan Fostier (Research in Computational Molecular Biology - 28th Annual International Conference, RECOMB 2024, Cambridge, MA, USA, April 29 - May 2, 2024, Proceedings, 2024)

b-move: Faster Bidirectional Character Extensions in a Run-Length Compressed Index - Lore Depuydt; Luca Renders; Simon Van de Vyver; Lennart Veys; Travis Gagie; Jan Fostier (24th International Workshop on Algorithms in Bioinformatics, WABI 2024, September 2-4, 2024, Royal Holloway, London, United Kingdom, 2024)

Pan-genome de Bruijn graph using the bidirectional FM-index - Lore Depuydt; Luca Renders; Thomas Abeel; Jan Fostier (BMC Bioinform., 2023)

Faster Maximal Exact Matches with Lazy LCP Evaluation - Adrián Goga; Lore Depuydt; Nathaniel K. Brown; Jan Fostier; Travis Gagie; Gonzalo Navarro (CoRR, 2023)

Suffixient Sets - Lore Depuydt; Travis Gagie; Ben Langmead; Giovanni Manzini; Nicola Prezza (CoRR, 2023)

Approximate Pattern Matching Using Search Schemes and In-Text Verification - Luca Renders; Lore Depuydt; Jan Fostier (Bioinformatics and Biomedical Engineering - 9th International Work-Conference, IWBBIO 2022, Maspalomas, Gran Canaria, Spain, June 27-30, 2022, Proceedings, Part II, 2022)