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Ralf Herwig
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2020 – today
- 2022
- [j20]Atanas Kamburov
, Ralf Herwig
ConsensusPathDB 2022: molecular interactions update as a resource for network biology. Nucleic Acids Res. 50(D1): 587-595 (2022) - [c3]Nhan Nguyen
A bioinformatics workflow to detect genes with DNA methylation alterations: a case study of analyzing MeDIP-seq data in cardiac microtissue exposed to epirubicin. ICBBB 2022: 63-69
2010 – 2019
- 2016
- [j19]Christopher Hardt
ToxDB: pathway-level interpretation of drug-treatment data. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j18]Diana M. Hendrickx
diXa: a data infrastructure for chemical safety assessment. Bioinform. 31(9): 1505-1507 (2015) - 2014
- [j17]Matthias Lienhard, Christina Grimm
MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments. Bioinform. 30(2): 284-286 (2014) - 2013
- [j16]Atanas Kamburov
The ConsensusPathDB interaction database: 2013 update. Nucleic Acids Res. 41(Database-Issue): 793-800 (2013) - 2012
- [j15]Felix Dreher, Thomas Kreitler, Christopher Hardt
DIPSBC - data integration platform for systems biology collaborations. BMC Bioinform. 13: 85 (2012) - [j14]Atanas Kamburov
Cluster-based assessment of protein-protein interaction confidence. BMC Bioinform. 13: 262 (2012) - [j13]Atanas Kamburov
IntScore: a web tool for confidence scoring of biological interactions. Nucleic Acids Res. 40(Web-Server-Issue): 140-146 (2012) - 2011
- [j12]Atanas Kamburov
Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA. Bioinform. 27(20): 2917-2918 (2011) - [j11]Atanas Kamburov
ConsensusPathDB: toward a more complete picture of cell biology. Nucleic Acids Res. 39(Database-Issue): 712-717 (2011) - [j10]Rachel Cavill, Atanas Kamburov
Consensus-Phenotype Integration of Transcriptomic and Metabolomic Data Implies a Role for Metabolism in the Chemosensitivity of Tumour Cells. PLoS Comput. Biol. 7(3) (2011) - 2010
- [j9]Axel Rasche, Ralf Herwig
ARH: predicting splice variants from genome-wide data with modified entropy. Bioinform. 26(1): 84-90 (2010) - [j8]Konstantin Pentchev, Keiichiro Ono, Ralf Herwig
Evidence mining and novelty assessment of protein-protein interactions with the ConsensusPathDB plugin for Cytoscape. Bioinform. 26(21): 2796-2797 (2010)
2000 – 2009
- 2009
- [j7]Hendrik Hache, Christoph K. Wierling
GeNGe: systematic generation of gene regulatory networks. Bioinform. 25(9): 1205-1207 (2009) - [j6]Hendrik Hache, Hans Lehrach, Ralf Herwig
Reverse Engineering of Gene Regulatory Networks: A Comparative Study. EURASIP J. Bioinform. Syst. Biol. 2009 (2009) - [j5]Atanas Kamburov
ConsensusPathDB - a database for integrating human functional interaction networks. Nucleic Acids Res. 37(Database-Issue): 623-628 (2009) - 2007
- [j4]Axel Rasche, Ralf Herwig:
T2DM-GeneMiner a web resource for meta-analysis and marker identification for type 2 diabetes mellitus. BMC Bioinform. 8(S-8) (2007) - 2005
- [j3]Witold E. Wolski, Maciej Lalowski
Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process. BMC Bioinform. 6: 285 (2005) - 2003
- [c2]Christoph Dieterich, Ralf Herwig, Martin Vingron:
Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites. ECCB 2003: 50-56 - 2002
- [j2]Christoph K. Wierling
Simulation of DNA array hybridization experiments and evaluation of critical parameters during subsequent image and data analysis. BMC Bioinform. 3: 29 (2002) - 2000
- [j1]Ralf Herwig, Armin Otto Schmitt
Information theoretical probe selection for hybridisation experiments. Bioinform. 16(10): 890-898 (2000) - [c1]Steffen Hennig, Ralf Herwig, Matthew Clark, Pia Aanstad, A. Musa, John O'Brien, C. Bull, Uwe Radelof, Georgia Panopoulou, Albert J. Poustka, Hans Lehrach:
A data-analysis pipeline for large-scale gene expression analysis. RECOMB 2000: 165-173
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