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onminiasm_CUDA

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Commits on Jan 29, 2016

• revert a version close to r104

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  a46399a

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• another way to discard weak overlap

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  8bc4478

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Commits on Jan 25, 2016

• use matching length for short overlap removal

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Commits on Nov 9, 2015

• r71: fixed a gcc warning (should not happen)

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  a9469f0

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• r70: remove biloops

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  23860e2

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• for clarity

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• r60: fixed a gcc warning

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Commits on Nov 8, 2015

• cut internal sequences

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  3fd2215

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• better tip cutting in theory, but results diff

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  2dabfce

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• keep more info during extend

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• del-aware utg end detection and utg extension

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• code cleanup

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Commits on Nov 5, 2015

• added asg

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  48808d2

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