Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Visualizing transcript structure and annotation using ggplot2

Tool for plotting sequencing data along genomic coordinates.

best way to save what you love

Python package with CLI for the analysis of single cell methylation data.

👷 Fasten toolkit, for streaming operations on fastq files

A beautiful, simple, clean, and responsive Jekyll theme for academics

A markup-based typesetting system that is powerful and easy to learn.

https://www.sc-best-practices.org

Python packaging and dependency management made easy

Support for blend modes in ggplot2

Collections of library structure and sequence of popular single cell genomic methods

An extremely fast Python linter and code formatter, written in Rust.

Latent Embedding Multivariate Regression

📝 A nicely formatted LaTeX preprint template

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

Cell type pipes for R

Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSCAn

Home to some alternate facetting for ggplot2

On top of spaghetti, all covered in cheese....

showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.

A conda-forge distribution.

A robust Python tool for text-based AI training and generation using GPT-2.

Use SVG images as ggplot points

An R package to simulate colorblindness on R figures.

muon is a multimodal omics Python framework

Autohotkey Script for typing Greek Letters by simply activating the Capslock

post-clustering differential expression test

Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜