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nobias-fht

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README.md

Welcome to the National Facility for Bioimage Analysis based at Human Technopole in Milan, Italy.

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advanced-scripting advanced-scripting Public

ImageJ Macro 2
pasteur_n2v pasteur_n2v Public

Instructions for DL restoration workshop.

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Showing 10 of 16 repositories

kymograph-synthesis Public
A repository for generating synthetic kymographs

nobias-fht/kymograph-synthesis’s past year of commit activity

Python 1 BSD-3-Clause 0 0 0 Updated Dec 5, 2025
cell_boundaries Public

nobias-fht/cell_boundaries’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Nov 27, 2025
harschnitz-organoid-nuclei Public
Nuclear segmentation and quantification of organoid slices

nobias-fht/harschnitz-organoid-nuclei’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Nov 20, 2025
testa-organoid-nuclei Public
Nuclear Segmentation on organoid slices

nobias-fht/testa-organoid-nuclei’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Sep 17, 2025
protrusion-splitting Public
Repository for Kalebic protrusion splitting project

nobias-fht/protrusion-splitting’s past year of commit activity

Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Apr 23, 2025
facility-sop Public
SOPs for human technopole image analysis unit

nobias-fht/facility-sop’s past year of commit activity

0 BSD-3-Clause 0 0 0 Updated Feb 10, 2025
cellmap_pipelines Public
Utilities to run CellMap training and fine-tuning

nobias-fht/cellmap_pipelines’s past year of commit activity

Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Dec 18, 2024
erdmann-cell-counting Public
Counting of DAPI-stained cells embedded in gel

nobias-fht/erdmann-cell-counting’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Sep 5, 2024
chabot_2024 Public
Radial shape analysis for Chabot 2024

nobias-fht/chabot_2024’s past year of commit activity

Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Jul 15, 2024
headless_fiji Public
A proof of concept pipeline to download, update and run Fiji in headless mode.

nobias-fht/headless_fiji’s past year of commit activity

Shell 2 BSD-3-Clause 0 0 0 Updated Jun 28, 2024

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