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Pull requests list

Clean up the tutorial
#3613 by mdehoon was merged Jun 11, 2021 Loading…
3 tasks done
1
Raise Error when single sequence is passed to motifs.Instances
#3611 by Caiofcas was merged Jun 11, 2021 Loading…
3 tasks done
1
5
Remove unreachable code in Nexus.py
#3610 by Caiofcas was merged Sep 28, 2021 Loading…
3 tasks done
1
@etal
3
improved readability and slight speedup
#3609 by fabianegli was merged Jun 11, 2021 Loading…
3 tasks done
3
Refactor inner loops in consensus functions
#3608 by Caiofcas was closed Jul 25, 2022 • Draft
3 tasks done
1
1
make QueryResult.pop behave like dict.pop
#3605 by fabianegli was closed Jul 12, 2021 Loading…
2 of 5 tasks
1
2
Remove all occurrences of OrderedDict in biopython
#3598 by fabianegli was merged Jun 22, 2021 Loading…
3 tasks done
1
22
In PairwiseAlignment, deprecate path and replace by coordinates
#3596 by mdehoon was merged Jun 12, 2021 Loading…
3 tasks done
1
indicate the existence of qualifiers in repr
#3595 by fabianegli was merged Jun 8, 2021 Loading…
1
2
Cz fix triple underscore
#3592 by zhuchcn was merged Jun 7, 2021 Loading…
3 tasks done
1
1
In PairwiseAlignment, allow iterables as column indices when extracting a subalignment
#3590 by mdehoon was merged Jun 6, 2021 Loading…
3 tasks done
1
allow iterables as column indices in a PairwiseAlignment
#3589 by mdehoon was merged Jun 5, 2021 Loading…
3 tasks done
1
adds Ahmad ASA values to PDB DSSP
#3588 by Caiofcas was merged Jul 27, 2022 Loading…
3 tasks done
1
@JoaoRodrigues
8
include reverse strand in PairwiseAlignment getitem
#3585 by mdehoon was merged Jun 5, 2021 Loading…
3 tasks done
1
allow extraction of a single row using a row index only
#3584 by mdehoon was merged Jun 4, 2021 Loading…
3 tasks done
2
Remove deprecated SequentialSequenceWriter
#3583 by peterjc was merged Jun 5, 2021 Loading…
3 tasks done
1
allow extracting one column from a PairwiseAlignment
#3582 by mdehoon was merged Jun 4, 2021 Loading…
3 tasks done
1
Post-release version bump to 1.80.dev0
#3581 by JoaoRodrigues was merged Jun 4, 2021 Loading…
1
Use Github Actions for CI in place of Travis Enhancement
#3580 by JoaoRodrigues was merged Jun 24, 2021 Loading…
8 of 10 tasks
9
rm Bio.Applications from Phylo section in the tutorial
#3579 by Caiofcas was merged Jun 5, 2021 Loading…
3 tasks done
4
feat(SeqFeature): store description, evidence and status of sequence features
#3578 by fabianegli was merged Jun 4, 2021 Loading…
3 tasks done
1
23
Enforces D105 in ExPASy, motifs and SeqIO modules.
#3573 by Caiofcas was merged Jun 3, 2021 Loading…
3 tasks done
10
Fix LaTeX syntax to allow documentation to build.
#3571 by JoaoRodrigues was merged Jun 1, 2021 Loading…
2
adds Fedora dependencies for building documentation
#3570 by Caiofcas was merged Jun 6, 2021 Loading…
3 tasks done
4
Bio.Clustalw has been removed
#3569 by mdehoon was merged Jun 4, 2021 Loading…
3 tasks done
2
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