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A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Repository to host tool-specific module files for the Nextflow DSL2 community!

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

开发者边车，github打不开，github加速，git clone加速，git release下载加速，stackoverflow加速

No fortress, purely open ground. OpenManus is Coming.

A mini, open-weights, version of our Proxy assistant.

A simple screen parsing tool towards pure vision based GUI agent

使用Github Action将国外的Docker镜像转存到阿里云私有仓库，供国内服务器使用，免费易用

This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shot active learning.

The second version of the Kraken taxonomic sequence classification system

Copy number variant detection from targeted DNA sequencing

LLM training in simple, raw C/CUDA

De novo assembler for single molecule sequencing reads using repeat graphs

Code for running RFdiffusion

KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

MMseqs2: ultra fast and sensitive search and clustering suite

Normalization of RNA-seq gene expression

Python package with helper tools for the nf-core community.

Tool for identifying adapter sequences from single-end sequencing files

hybrid assembly pipeline for bacterial genomes

fastq to polished sequenses: pipeline suitable for mixed samples and long (Nanopore) reads

De novo clustering of long transcript reads into genes

reference-based long read assemblies of bacterial genomes