gcpy/benchmark/config/1yr_ch4_benchmark.yml
gcpy/benchmark/config/1yr_fullchem_benchmark.yml
gcpy/benchmark/config/1yr_tt_benchmark.yml
gcpy/examples/diagnostics/compare_diags,yml
- Updated the path to the regridding weights to the new default
  path on Harvard Cannon.  The old path had now been disabled.

CHANGELOG.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

gcpy/benchmark/config/1mo_benchmark.yml
- Updated the weights_dir path to the current proper setting.
  Should have done this in the previous commit but we forgot.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

This merge brings PR # (Update default paths to regridding weights in
YAML files, by @yantosca) into the GCPy 1.6.1 development stream.

This PR updates the benchmark config files and compare_diags.yml file
to use the new path to regridding weights on Cannon.  The previous
path was disabled in February 2025.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

docs/source/Install-Mamba-Conda.rst
- Moved Mamba/Conda installation instructions out of the
  Getting-Started-with-GCPy.rst and into this file.

docs/source/Getting-Started-with-GCPy.rst
- Removed Mamba/Conda installation instructions
- Added back the PyPI installation instructions
- Fixed placement of certain anchor tags
- Updated level headings

docs/source/KPP-Standalone.rst
- Fixed issue flagged by Sphinx: Make sure that the "Source code
  reference" section is completely covered by "=" characters on
  top and bottom.

docs/source/index.rst
- Added Install-Mamba-Conda to Supplemental Guides toctree

CHANGELOG.md
- Updated accordingly

README.md
docs/source/ht
- Added links to "Anaconda", "PyPI", "Platforms", "Downloads" badges
- Removed "Latest pre-release" badge

CHANGELOG.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

docs/source/Getting-Started-with-GCPy.rst
- Edited the instructions for installing GCPy with mamba or conda
  to better reflect the required commands

CHANGELOG.md
- Updated accordingly

docs/source/Release-Guide.rst
- Added "GCST only" to title
- Restored instructions for conda-forge
- Added instructions on what to do if the checks on the
  geoschem-gcpy-feedstock PR fails

docs/source/index.rst
- Title now reads "GCPY: The GEOS-Chem Python Toolkit"
- Added Mamba/Conda installation to supplemental guide toctree

CHANGELOG.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

.github/workflows/build-gcpy-environment-py312.yml
- Renamed from build-gcpy-environment.yml (for Python 3.12)

.github/workflows/build-gcpy-environment-py313.yml
- Added new GitHub Action workflow for Python 313

docs/environment_files/gcpy_environment_py312.yml
- Renamed from "gcpy_environment.yml"

docs/environment_files/gcpy_environment_py313.yml
- Added, with package specifications for Python 313

docs/environment_files/gcpy_requirements.txt
requirements.txt
- Removed

docs/source/Getting-Started-with-GCPy.rst
- Added package versions for Python 3.13
- Updated documentation, added claryifying text

CHANGELOG.md
docs/environment_files/README.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

.githug/workflows/build-rtd-environment.yml
- Removed Python 3.8 from the "python-version" list.
  Python 3.8 has now been de-supported.

CHANGELOG.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

This merge brings PR #353 (Add support for Python 3.13 -- update
environment files and GitHub Actions, by @yantosca) into the GCPy
1.7.0 development stream.

This PR adds a new Python environment for GCPy based on Python 3.13,
as well as corresponding GitHub Actions.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

docs/environment_files/gcpy_environment_py312.yml
docs/environment_files/gcpy_environment_py313.yml
setup.py
- Changed the dask version from 2024.5.2 to 2025.3.0.
  This fixes a critical security issue raised by @dependabot.

CHANGELOG.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

docs/environment_files/read_the_docs_environment.yml
docs/environment_files/read_the_docs_requirements.txt
- Updated jinja2 to version 3.1.6 to fix a security issue

CHANGELOG.md
- Updated accordingly

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

This merge brings PR #354 (Update to dask 2025.3.0 and jinja2 3.1.6 to
fix security issues identified by dependabot, by @yantosca) into the
GCPy 1.6.1 development stream.

This PR updates dask to 2025.3.0 and jinja2 to 3.1.6 to fix security
issues identified by @dependabot.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

docs/source/Getting-Started-with-GCPy.rst
- Updated the dask version to 2025.3.0 in the list of software
  dependencies in the Installation section.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

This merge brings documentation updates for the GCPy 1.6.1 release
into the dev branch.  We have updated the installation section and
have moved installation instructions for mamba/conda into a
supplemental guide.  We have also updated the guide to releasing
new versions for the GCST.  Finally, we have added new badges to
the README.md and the ReadTheDocs home page.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

We have changed the GCPy version number from 1.6.0 to 1.6.1
in the usual places.  This is in advance of the GCPy 1.6.1
release.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>

This is the release commit of GCPy 1.6.1.  Please see the CHANGELOG.md
for a list of updaes.  Documentation for GCPy 1.6.1 is now available
at gcpy.readthedocs.io.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>