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Showing results

Successful Job Applications and Grants

809 147 Updated Sep 11, 2025

Gene cluster comparison figure generator

Python 622 74 Updated Nov 25, 2024

ALF artificial life simulator

TeX 4 1 Updated Apr 27, 2020

A JBrowse plugin to view multiple alignment format (MAF) files

JavaScript 27 4 Updated Oct 25, 2023

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

C++ 570 173 Updated May 13, 2025

a minimal C++ interval tree implementation

C++ 236 71 Updated Mar 11, 2021

alignment to variation graph inducer

C++ 150 20 Updated Nov 5, 2025

Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules

Python 88 26 Updated Jun 19, 2018

jobTree based python wrapper to run the genome simulation tool suite Evolver

Python 9 1 Updated Apr 27, 2012

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.

C++ 70 17 Updated Oct 29, 2020

A Variant Call Format reader for Python.

Python 417 198 Updated Sep 22, 2023

Rolling Hash C++ Library

C++ 189 33 Updated Mar 14, 2024