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@Gregor-Mendel-Institute @conda-forge @imbforge @bioconda @nf-core

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20 stars written in C
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MicroPython - a lean and efficient Python implementation for microcontrollers and constrained systems

C 21,247 8,600 Updated Dec 19, 2025

i3-compatible Wayland compositor

C 16,325 1,210 Updated Dec 21, 2025

This is the latest version of the internal repository from Pebble Technology providing the software to run on Pebble watches. Proprietary source code has been removed from this repository and it wi…

C 4,939 386 Updated Feb 25, 2025

A board replacement for the classic Casio F-91W wristwatch

C 1,774 290 Updated May 7, 2025

OpenHPC Integration, Packaging, and Test Repo

C 957 203 Updated Dec 23, 2025

A fresh approach to package installation

C 777 75 Updated Dec 23, 2025

Official home of genome aligner based upon notion of Cactus graphs

C 635 123 Updated Dec 16, 2025

A utility for running arbitrary commands when files change. Uses kqueue(2) or inotify(7) to avoid polling. entr responds to file system events by executing command line arguments or by writing to a…

C 616 21 Updated Oct 4, 2023

Sequence-to-graph mapper and graph generator

C 464 40 Updated Aug 11, 2025

Align proteins to genomes with splicing and frameshift

C 388 21 Updated Sep 20, 2025

Pairwise whole genome aligner

C 223 12 Updated Nov 30, 2025

Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)

C 160 28 Updated Oct 22, 2025
C 121 12 Updated Nov 15, 2025

Detection of incorrectly labeled sequences across kingdoms

C 87 8 Updated Oct 25, 2022

A statistical framework for ploidy estimation using NGS short-read data

C 62 7 Updated Apr 5, 2018

A versatile pairwise aligner for genomic and spliced nucleotide sequences

C 56 8 Updated Jun 4, 2024

Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.

C 51 4 Updated Nov 24, 2025

Bidirectional WFA (Paper)

C 48 3 Updated May 20, 2024

slow5lib is a software library for reading & writing SLOW5 files.

C 47 4 Updated Jul 15, 2025