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Starred repositories

78 stars written in Java
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Vaadin CDI example project

Java 44 21 Updated Mar 31, 2016

chemalot: a command-line cheminformatics open-source package

Java 38 6 Updated Jun 4, 2023

Prototype real-time music visualizations in Java. https://sites.google.com/site/musicaudiohp

Java 34 15 Updated Sep 17, 2015

Brand spanking new PHP feature for Studio 3

Java 30 23 Updated Dec 1, 2020

Java Chess Engine

Java 27 17 Updated Oct 30, 2022

a fractal flame editor for electric sheep

Java 27 10 Updated Jan 27, 2019

Bioclipse2 Core.

Java 25 12 Updated Jun 11, 2021
Java 21 15 Updated Dec 1, 2020

The web server application and directly connected components for a MassBank web server

Java 18 22 Updated Jul 23, 2025

Applications using AMBIT and examples how to call AMBIT modules

Java 15 5 Updated Feb 19, 2022

Fractal Music Generator is a downloadable cross-platform application for creating polyphonic audio and midi music from fractals.

Java 13 1 Updated Mar 23, 2023

Tinker-FFE: Molecular Engineering GUI for Tinker

Java 11 1 Updated Oct 6, 2025

Bioclipse Cheminformatics Feature

Java 10 14 Updated Jan 25, 2019

🎵 A Basic Fractal Music Generator

Java 7 2 Updated May 2, 2017

Reference implemention of the IUPAC JCAMP-DX spectroscopy data standard. Fork of https://sourceforge.net/projects/jcamp-dx/

Java 7 7 Updated Apr 28, 2025

A graphical visualizer for MIDI files for making MIDI animations

Java 7 2 Updated Feb 24, 2017

CSC 570 Bioinformatics Fall 2011

Java 5 1 Updated Dec 28, 2011

A PathVisio plugin to import SBML models as SBGN-PD diagrams.

Java 5 1 Updated Dec 30, 2015

The Chemistry Development Kit

Java 5 Updated Mar 7, 2017

Bioclipe2 Decision Support.

Java 5 4 Updated Feb 2, 2017

MeTA Studio is programmable IDE tailored for a computational chemist.

Java 5 1 Updated Nov 24, 2023

moved from https://github.com/ideaconsult/examples-ambit/tree/master/appdomain-example

Java 4 Updated May 18, 2018

Chemical element database for Android.

Java 4 1 Updated Mar 17, 2014

Generate fractals based on iterated function systems, e.g. Fractal flames, the Sierpenski triangle and Barnsley's Fern

Java 4 Updated Feb 27, 2023

Open OCHEM code

Java 3 2 Updated Jun 30, 2025

A small app that let's users manipulate the Circle of Fifths for chord progression

Java 3 Updated Jun 19, 2018

Mass++ ver. 4

Java 3 1 Updated Apr 19, 2025

Basic automated music generation

Java 3 2 Updated Nov 26, 2011

Java API for MS/MS search results by Mascot (Matrix Science).

Java 3 Updated Oct 12, 2021

IUCLID5 support

Java 2 2 Updated Nov 20, 2021