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79 stars written in Shell
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Code for polyfun fine-mapping with updated mammalian and primate genome constraint measures.

Shell 1 Updated Nov 3, 2022

Code and data from the indel data

Shell 1 1 Updated Jun 2, 2019
Shell 1 1 Updated Feb 29, 2024
Shell 1 Updated Nov 20, 2017

Scripts, notes and documents about the BIND annotation workflow (BIND: ab initio gene predictions by BRAKER combined with gene predictions INferred Directly from alignment of RNA-Seq evidence to th…

Shell 1 Updated Jan 18, 2021

scripts and intermediate files used to annotate TEs in Jiao et al.

Shell 1 Updated May 26, 2017

A shell script which implements GATK pipeline for variant calling.

Shell 1 Updated Nov 30, 2014

The genomic data for Papaver species

Shell 1 Updated Apr 28, 2021

Revision of Pfam domain profile HMMs to improve capture of homologous domains in underrepresented/non-model species.

Shell 1 1 Updated Dec 16, 2022

Unix, R and python tools for genomics and data science

Shell 1 Updated Oct 22, 2019

Trying to find syntenic blocks between genomes

Shell 1 Updated Jun 9, 2017

FastEAR - Fast(er) Extraction of Alignment Regions from FASTA

Shell 1 Updated Feb 22, 2022

The pipeline in the analyze of P. ilicifolia genome

Shell 1 2 Updated Sep 22, 2018
Shell 1 2 Updated Apr 11, 2019

Thaung Sein Win Genome Assembly

Shell 1 Updated Nov 3, 2021