Lib.rs

› Keywords #bioinformatics #sg-rna #crispr-sequencing #genomics #sequencing #bio

#crispr

  1. crispr_screen

    A fast and configurable differential expression analysis tool for CRISPR screens

    v0.3.21 1.3K #bioinformatics #sg-rna #crispr #degs #cli

  2. diced

    reimplementation of the MinCED algorithm for identifying CRISPRs in full or assembled genomes

    v0.1.3 #genomics #crispr #bioinformatics

  3. sgcount

    A fast and flexible sgRNA counter

    v0.1.35 1.0K #bioinformatics #crispr-sequencing #sequencing #crispr #sg-rna

  4. dgcount

    Dual guide CRISPR counter

    v0.2.0 #counter #crispr #dual #guide #bio #sg-rna

  5. nanocount

    A dual-guide protospacer counter for long-read nanopore data

    v0.1.1 #long-read #nanopore #grep #crispr #alignment #bio

  6. intc

    *-INC method to calculate an empirical FDR for non-targeting controls in CRISPR screens

    v0.3.6 850 #crispr-sequencing #bioinformatics #crispr #sequencing #sg-rna

  7. diced-py

    PyO3 bindings and Python interface to the diced crate

    v0.1.3 #genomics #crispr #bioinformatics

  8. geopagg

    algorithm for p-value aggregation of sgRNAs across gene groupings

    v0.3.1 650 #bioinformatics #crispr-sequencing #sg-rna #sequencing #crispr

  9. guide-counter

    Fast and accurate guide counting for CRISPR screens

    v0.1.3 #genomics #bioinformatics #crispr

  10. pilercr-parser

    A parser for the output of the PILER-CR CRISPR array annotation tool

    v1.1.0 #crispr #piler-cr #bioinformatics #pilercr

  11. casmap

    A way to count and characterize constructs for cas12 6-plex CRISPR screens

    v0.1.3 #crispr-sequencing #crispr #bioinformatics #cas12 #sequencing

  12. alpha-rra

    algorithm for p-value aggregation on groups of genes

    v0.3.3 1.0K #crispr-sequencing #bioinformatics #sg-rna #crispr #sequencing

  13. casgen

    A way to generate cas12 6-plex CRISPR sequences

    v0.1.4 #crispr #crispr-sequencing #cas12 #bioinformatics #sequencing

  14. minced-parser

    A parser for the output of the MinCED CRISPR array annotation tool

    v2.0.0 #crispr #minced #bioinformatics

  15. crispr_helloworld

    Hello world project

    v0.1.1 #crispr #world

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  16. crispr

    designing sgRNAs for genome engineering using CRISPR/Cas9

    v0.1.0 #genome #sg-rna #designing #engineering

  17. crispr_temperature_calculator

    A package for calculating the temperature of a from celsius to fahrenheit

    v1.1.1 #temperature #crispr #calculator #fahrenheit #celsius