Lib.rs

› Keywords #bioinformatics #dna #dna-rna #secondary-structure #protein #bio

#rna

  1. modtector

    A high-performance modification detection tool in Rust

    v0.15.4 #bioinformatics #rna #detect #htslib #modification

  2. librna-sys

    Low-level bindings for the ViennaRNA library

    v0.3.1 #bioinformatics #rna #viennarna #ffi #sys

  3. nanalogue

    BAM/Mod BAM parsing and analysis tool with a single-molecule focus

    v0.1.2 #rna #dna-rna #dna #bio #modbam #dna-methylation #bam

  4. rnapkin

    CLI utility for drawing RNA secondary structure

    v0.3.9 160 #secondary-structure #draw #rna #bioinformatics #fold

  5. consalifold

    Consensus Secondary Structure Predictor Engaging Structural Alignment-based Error Correction

    v0.1.17 #secondary-structure #rna #bioinformatics

  6. rna-ss-params

    RNA secondary structure parameters

    v0.1.24 250 #secondary-structure #rna #bioinformatics

  7. fuzzyfold

    Nucleic acid secondary structure kinetics

    v0.4.0 #secondary-structure #nearest-neighbor #dna-rna #kinetics #rna #dna #bio

  8. nucleob

    bioinformatics: nucleobases and amino acids statistics

    v1.1.1 #bioinformatics #dna-rna #genetics #dna #rna #protein

  9. consprob

    Quick Probability Inference Engine on RNA Structural Alignment

    v0.1.22 160 #structural-alignment #rna #bioinformatics

  10. consalign

    RNA Structural Aligner Based on Transfer-learning and Thermodynamic Ensemble Model

    v0.1.9 #structural-alignment #bioinformatics #rna

  11. ff_structure

    fuzzyfold's secondary structure representations

    v0.3.0 #secondary-structure #dna-rna #rna #dna #bio

  12. rna-algos

    RNA Bioinformatics Algorithms

    v0.1.37 280 #secondary-structure #rna #bioinformatics

  13. consprob-trained

    Trainable Probability Inference Engine on RNA Structural Alignment

    v0.1.11 #structural-alignment #rna #bioinformatics

  14. ff_energy

    fuzzyfold's nearest neighbor free energy evaluations

    v0.3.1 #nearest-neighbor #secondary-structure #dna-rna #rna #dna #bio

  15. ff_kinetics

    fuzzyfold's stochastic secondary structure simulations

    v0.4.0 #kinetics #secondary-structure #nearest-neighbor #dna-rna #rna #dna #bio

  16. cpr

    CapR, Efficient RNA Context Probability Estimator

    v1.1.0 #rna #secondary-structure #bioinformatics

  17. protein-translate

    Translate nucleotide sequence to protein

    v0.2.0 #bioinformatics #translation #protein #dna-rna #dna #rna

  18. jean_blosum

    BLOSUM feature for jean

    v0.1.0 #dna-rna #dna #rna #protein #matrix #blosum

  19. omics-variation

    Foundational representations of variation in the Rust omics ecosystem

    v0.2.0 140 #variations #omics #ecosystem #genomics #nucleotide #rna #data-structures #coordinate-system #dna

  20. prot_translate

    Translate nucleotide sequence to protein

    v0.1.0 #bioinformatics #protein #dna-rna #dna #rna

  21. phyloprob

    Program, which Predicts Average Posterior Probabilities on RNA Structural Alignment

    v0.1.2 #structural-alignment #rna #bioinformatics

  22. jean

    Computational biology utility library for Rust featuring sequence alignment, genome annotation, and I/O of biological files

    v0.1.0 #bioinformatics #biology #dna-rna #dna #rna #protein

  23. omics-molecule

    Foundational representations of biological molecules in the Rust omics ecosystem

    v0.1.0 #molecule #omics #nucleotide #ecosystem #representation #biological #genomics #coordinate-system #dna #rna

  24. protein_translation

    translate &str or String of RNA sequence with nucleotide into a Vec<&str> of their appropriate protein names

    v0.1.2 #rna #nucleotide #codon #protein #parser

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  25. jean_io

    I/O library feature for jean

    v0.1.0 #fasta-protein #dna-rna #dna #rna #protein #fasta #gff3

  26. jean_cut

    Codon usage tables feature for jean

    v0.1.0 #dna-rna #codons #dna #rna #protein

  27. jean_macros

    Macro library feature for jean

    v0.1.0 #biology #dna-rna #dna #rna #protein

  28. conshomfold

    Predicts Global Single RNA Secondary Structures to Consider Sparse Global Pairwise RNA Structural Alignments

    v0.1.1 #secondary-structure #rna #bioinformatics

  29. ncrs

    A lightweight Rust library for loading and storing nucleic acid sequences (DNA or RNA) and their annotations with minimum dependences

    v0.1.1 #bio #dna-rna #gff #dna #rna

  30. phylofold

    Program, which Predicts RNA Single Secondary Structures to Incorporate Phylogeny among Homologs

    v0.1.2 #secondary-structure #rna #bioinformatics

  31. phyloalifold

    Program, which Predicts RNA Consensus Secondary Structures to Incorporate Phylogeny among Homologs

    v0.1.3 #secondary-structure #rna #bioinformatics

  32. rna

    'Loot-Table Script' interpreter

    v0.1.2 #loot-table #json #merge #script

  33. prll-ri

    Parallel-RI, parallel executable binary to wrap RIblast

    v1.0.6 #rna #bioinformatics #interactomics #transcriptomics

  34. rnafamprob

    Program, Program for Estimations of Posterior Probabilities on RNA Structural Alignment

    v0.1.0 #structural-alignment #rna #bioinformatics

  35. jean_alignment

    Sequence alignment feature for jean

    v0.1.0 #sequence-alignment #dna-sequence #dna-rna #dna #rna #protein

  36. neofold

    Program, Program for Maximum-expected-accuracy Estimations of RNA Secondary Structures with Incorporating Homologous-RNA sequences

    v0.1.0 #secondary-structure #rna #bioinformatics

  37. jean_core

    Core package of jean

    v0.1.0 #bioinformatics #biology #protein #dna-rna #dna #rna