Model reproducibility: overview

SM Crook - Encyclopedia of Computational Neuroscience, 2022 - Springer
… An overview of theories and models of higherlevel … modeling of auditory processing in the
auditory pathway and auditory perceptual representation. The articles review modeling of the …

Measuring and establishing the accuracy and reproducibility of 3D printed medical models

E George, P Liacouras, FJ Rybicki, D Mitsouras - Radiographics, 2017 - pubs.rsna.org
… accuracy and reproducibility of the 3D model printing process. … and reproducible models
for individual clinical indications. … that will yield accurate reproducible models. It is important to …

The fundamental principles of reproducibility

OE Gundersen - … Transactions of the Royal Society A, 2021 - royalsocietypublishing.org
… as an example to illustrate this model. Based on this, reproducibility is defined. The definition
… Table 1 presents a short overview of the papers that are surveyed. Different terms are used …

Best practices for making reproducible biochemical models

VL Porubsky, AP Goldberg, AK Rampadarath… - Cell systems, 2020 - cell.com
… In addition, our goals for achieving reproducible biochemical models focus more on
creating reusable model artifacts, and our detailed practices provide specific guidelines that go …

Reproducibility in Machine Learning-based Research: Overview, Barriers and Drivers

H Semmelrock, T Ross-Hellauer, S Kopeinik… - arXiv preprint arXiv …, 2024 - arxiv.org
models without sharing private or sensitive data. The main benefit of this is, that ML models
… to decrease bias and leading to more reproducible ML models. The main aim of Privacy-…

Challenges in reproducibility, replicability, and comparability of computational models and tools for neuronal and glial networks, cells, and subcellular structures

T Manninen, J Aćimović, R Havela… - Frontiers in …, 2018 - frontiersin.org
… In this section, we give an overview of computational models used in our reproducibility,
replicability, and comparability studies. These include the models of intracellular signal …

Reproducibility in machine learning-driven research

H Semmelrock, S Kopeinik, D Theiler… - arXiv preprint arXiv …, 2023 - arxiv.org
… This work aims to provide an overview of the situation and identify the different drivers and
… Materials science ML models are used for the informed design of new materials. Recently, …

[HTML][HTML] Repeatability and reproducibility of radiomic features: a systematic review

A Traverso, L Wee, A Dekker, R Gillies - International Journal of Radiation …, 2018 - Elsevier
… Table 4 provides an overview of methodologic aspects and reporting … model, we believe
that external validation of the developed model should be performed, and only reproducible and …

Model integration in computational biology: the role of reproducibility, credibility and utility

J Karr, RS Malik-Sheriff, J Osborne… - Frontiers in systems …, 2022 - frontiersin.org
… is repeatability and reproducibility of models in publications and repositories. Repeatability
is the ability to repeat the same experiment with the same system, and reproducibility is the …

Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology

A Niarakis, D Waltemath, J Glazier… - Briefings in …, 2022 - academic.oup.com
… Correct and effective model annotation in community-supported … , reproducible and
interoperable computational models in … Overview of key needs to harmonise computational …