MITK-ModelFit: A generic open-source framework for model fits and their exploration in medical imaging–design, implementation and application on the example of …

C Debus, R Floca, M Ingrisch, I Kompan… - BMC …, 2019 - Springer
abstraction of the model function f ϕ, θ (x) seems trivial, but is nevertheless important for the
versatility of the whole concept. The abstraction … model class provides an abstract interface to …

Madym: A C++ toolkit for quantitative DCE-MRI analysis

M Berks, G Parker, R Little… - Journal of Open Source …, 2021 - discovery.ucl.ac.uk
… -classing the main abstract model class. … MITK-ModelFit (Debus et al., 2019) (also implemented
in C++) has probably the closest functionality to Madym. They differ in that MITK-ModelFit

MITK-ModelFit: Generic Open-Source Framework for Model Fitting

I Kompan, C Debus, M Ingrisch, K Maier-Hein… - … 15. bis 17. März 2020 in …, 2020 - Springer
Model fitting is employed in numerous medical imaging applications for quantitative parameter
estimation. Prominent examples include pharmacokinetic modelling of dynamic contrast-…

The Medical Imaging Interaction Toolkit: challenges and advances: 10 years of open-source development

M Nolden, S Zelzer, A Seitel, D Wald, M Müller… - International journal of …, 2013 - Springer
Abstract Purpose The Medical Imaging Interaction Toolkit (MITK) has been available as
open-source software for almost 10 years now. In this period the requirements of software …

PET parametric imaging: past, present, and future

G Wang, A Rahmim, RN Gunn - IEEE transactions on radiation …, 2020 - ieeexplore.ieee.org
Positron emission tomography (PET) is actively used in a diverse range of applications in
oncology, cardiology, and neurology. The use of PET in the clinical setting focuses on static (…

MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions

M Klemm, T Kirchner, J Gröhl, D Cheray… - International journal of …, 2017 - Springer
Abstract Purpose Due to rapid developments in the research areas of medical imaging, medical
image processing and robotics, computer-assisted interventions (CAI) are becoming an …

qMRI-BIDS: An extension to the brain imaging data structure for quantitative magnetic resonance imaging data

A Karakuzu, S Appelhoff, T Auer, M Boudreau… - Scientific Data, 2022 - nature.com
Abstract The Brain Imaging Data Structure (BIDS) established community consensus on the
organization of data and metadata for several neuroimaging modalities. Traditionally, BIDS …

Feasibility and robustness of dynamic 18F-FET PET based tracer kinetic models applied to patients with recurrent high-grade glioma prior to carbon ion irradiation

C Debus, A Afshar-Oromieh, R Floca, M Ingrisch… - Scientific reports, 2018 - nature.com
Abstract The aim of this study was to analyze the robustness and diagnostic value of
different compartment models for dynamic 18 F-FET PET in recurrent high-grade glioma (HGG). …

Efficient estimation of pharmacokinetic parameters from breast dynamic contrast-enhanced MRI based on a convolutional neural network for predicting molecular …

L Zhang, M Fan, L Li - Physics in Medicine & Biology, 2023 - iopscience.iop.org
Abstract Objective. Tracer kinetic models allow for estimating pharmacokinetic (PK)
parameters, which are related to pathological characteristics, from breast dynamic contrast-…

qMRI-BIDS: an extension to the brain imaging data structure for quantitative magnetic resonance imaging data

A Karakuzu, S Appelhoff, T Auer, M Boudreau… - medRxiv, 2021 - medrxiv.org
Abstract The Brain Imaging Data Structure (BIDS) established community consensus on the
organization of data and metadata for several neuroimaging modalities. Traditionally, BIDS …