Towards a proteome-scale map of the human protein–protein interaction network

JF Rual, K Venkatesan, T Hao, T Hirozane-Kishikawa… - Nature, 2005 - nature.com
Systematic mapping of protein–protein interactions, or ‘interactome’ mapping, was initiated
in model organisms, starting with defined biological processes 1 , 2 and then expanding to …

A Map of the Interactome Network of the Metazoan C. elegans

…, M Boxem, PO Vidalain, JDJ Han, A Chesneau, T Hao… - Science, 2004 - science.org
To initiate studies on how protein-protein interaction (or “interactome”) networks relate to
multicellular functions, we have mapped a large fraction of the Caenorhabditis elegans …

Evidence for dynamically organized modularity in the yeast protein–protein interaction network

JDJ Han, N Bertin, T Hao, DS Goldberg, GF Berriz… - Nature, 2004 - nature.com
In apparently scale-free protein–protein interaction networks, or ‘interactome’ networks 1 , 2
, most proteins interact with few partners, whereas a small but significant proportion of …

High-quality binary protein interaction map of the yeast interactome network

…, F Gebreab, N Li, N Simonis, T Hao… - Science, 2008 - science.org
Current yeast interactome network maps contain several hundred molecular complexes with
limited and somewhat controversial representation of direct binary interactions. We carried …

A proteome-scale map of the human interactome network

…, J Tavernier, MA Calderwood, DE Hill, T Hao… - Cell, 2014 - cell.com
Just as reference genome sequences revolutionized human genetics, reference maps of
interactome networks will be critical to fully understand genotype-phenotype relationships. Here…

Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library

JF Rual, J Ceron, J Koreth, T Hao, AS Nicot… - Genome …, 2004 - genome.cshlp.org
The recently completed Caenorhabditis elegans genome sequence allows application of
high-throughput (HT) approaches for phenotypic analyses using RNA interference (RNAi). As …

A reference map of the human binary protein interactome

…, P Aloy, GD Bader, J De Las Rivas, S Gaudet, T Hao… - Nature, 2020 - nature.com
Global insights into cellular organization and genome function require comprehensive
understanding of the interactome networks that mediate genotype–phenotype relationships 1 , 2 . …

An empirical framework for binary interactome mapping

…, U Stelzl, I Lemmens, T Hirozane-Kishikawa, T Hao… - Nature …, 2009 - nature.com
Several attempts have been made to systematically map protein-protein interaction, or 'interactome',
networks. However, it remains difficult to assess the quality and coverage of existing …

A protein–protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration

J Lim, T Hao, C Shaw, AJ Patel, G Szabó, JF Rual… - Cell, 2006 - cell.com
Many human inherited neurodegenerative disorders are characterized by loss of balance
due to cerebellar Purkinje cell (PC) degeneration. Although the disease-causing mutations …

Evidence for Network Evolution in an Arabidopsis Interactome Map

…, F Gebreab, G Ghoshal, P Gilles, BJ Gutierrez, T Hao… - Science, 2011 - science.org
Plants have unique features that evolved in response to their environments and ecosystems.
A full account of the complex cellular networks that underlie plant-specific functions is still …