Профили пользователей по запросу "Katharina Waury"

Katharina Waury

PhD Student, Vrije Universiteit Amsterdam
Подтвержден адрес электронной почты в домене vu.nl
Цитируется: 110

Bioinformatics tools and data resources for assay development of fluid protein biomarkers

K Waury, EAJ Willemse, E Vanmechelen… - Biomarker …, 2022 - Springer
Fluid protein biomarkers are important tools in clinical research and health care to support
diagnosis and to monitor patients. Especially within the field of dementia, novel biomarkers …

Deciphering Protein Secretion from the Brain to Cerebrospinal Fluid for Biomarker Discovery

K Waury, R de Wit, IMW Verberk… - Journal of proteome …, 2023 - ACS Publications
Cerebrospinal fluid (CSF) is an essential matrix for the discovery of neurological disease
biomarkers. However, the high dynamic range of protein concentrations in CSF hinders the …

Ten quick tips for sequence-based prediction of protein properties using machine learning

Q Hou, K Waury, D Gogishvili… - PLOS Computational …, 2022 - journals.plos.org
The ubiquitous availability of genome sequencing data explains the popularity of machine
learning-based methods for the prediction of protein properties from their amino acid …

Multi-omics interdisciplinary research integration to accelerate dementia biomarker development (MIRIADE)

E Mavrina, L Kimble, K Waury, D Gogishvili… - Frontiers in …, 2022 - frontiersin.org
Proteomics studies have shown differential expression of numerous proteins in dementias
but have rarely led to novel biomarker tests for clinical use. The Marie Curie MIRIADE project …

Proteome encoded determinants of protein sorting into extracellular vesicles

K Waury, D Gogishvili, R Nieuwland… - Journal of …, 2024 - Wiley Online Library
Extracellular vesicles (EVs) are membranous structures released by cells into the extracellular
space and are thought to be involved in cell‐to‐cell communication. While EVs and their …

SeRenDIP-CE: sequence-based interface prediction for conformational epitopes

Q Hou, B Stringer, K Waury, H Capel… - …, 2021 - academic.oup.com
Motivation Antibodies play an important role in clinical research and biotechnology, with their
specificity determined by the interaction with the antigen’s epitope region, as a special type …

Comparison of sequence-and structure-based antibody clustering approaches on simulated repertoire sequencing data

K Waury, SH Lelieveld, S Abeln, HJ van den Ham - bioRxiv, 2024 - biorxiv.org
Repertoire sequencing allows us to investigate the antibody-mediated immune response.
The clustering of sequences is a crucial step in the data analysis pipeline, aiding in the …

Data-driven evaluation of suitable immunogens for improved antibody selection

K Waury, H Kvartsberg, H Zetterberg, K Blennow… - bioRxiv, 2024 - biorxiv.org
Antibodies are indispensable in laboratory and clinical applications due to their high
specificity and affinity for protein antigens. However, selecting the right protein fragments as …

A pipeline for the identification and examination of proteins implicated in frontotemporal dementia

K Waury - 2020 - diva-portal.org
Frontotemporal dementia is a neurodegenerative disorder with high heterogeneity on the
genetic, pathological and clinical level. The familial form of the disease is mainly caused by …

Methods to discover and validate biofluid-based biomarkers in neurodegenerative dementias

…, FJ Meda, P Mohaupt, S Mravinacová, K Waury… - Molecular & Cellular …, 2023 - ASBMB
Neurodegenerative dementias are progressive diseases that cause neuronal network
breakdown in different brain regions often because of accumulation of misfolded proteins in the …