Open Source Algorithms - Page 5
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BigAl
a free cross platform calculator for calculating BIG numbers
BigAl is a free open source and platform independent software for calculating really BIG numbers. It supports not only standard arithmetic, but also exact period determination, predefined factorials, fibonacci with seeds, factorization, nth root, etc -
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Temporal Inference Engine
A real time inference engine for temporal logical specifications
A real time inference engine for temporal logical specifications, which is able to acquire, process and generate any binary or real signal through POSIX IPC, files or UNIX sockets. Specifications of signals and dynamic systems are represented as special graphs and executed in real time, with a predictable sampling time of few milliseconds. Real time signal processing, dynamic system control, state machine modeling and logical property verification are some fields of application of this software. The accepted language provides timed logic and mathematical operators, conditional operators, interval operators, bounded quantifiers and parametrization of signals. -
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mstp-lib
RSTP / MSTP Library and Simulator - moved to GitHub
Project moved to GitHub. Check out the description there. https://github.com/adigostin/mstp-lib -
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CloudI is an open-source private cloud computing framework for efficient, secure, and internal data processing. CloudI provides scaling for previously unscalable source code with efficient fault-tolerant execution of ATS, C/C++, Erlang/Elixir, Go, Haskell, Java, JavaScript/node.js, OCaml, Perl, PHP, Python, Ruby, or Rust services. The bare essentials for efficient fault-tolerant processing on a cloud!
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This distribution contains a novel fast CRC generation algorithm developed by Intel. This algorithm runs at under 3 cycles per byte (vs. 7) and thus triples the performance of existing CRC implementations. Slicing-by-8 uses an 8KB cache footprint.
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This project is primarily for testing and demonstrating ideas for an ultimate programming system, though it might very well become a very usable programming system in time. It is being developed with PowerBasic's PBWin7 compiler.
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Pascal libraries and components. Library for: Matrix, Matrix Math, Math & statistic, CSV, URL, Counters, dir/file scanning, file/string/… utils, progress bar, … Components: DataList, Line oriented reports, Gauge, Syllable (Italian), …
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hbox
Sokoban solver written in Ada
This is a commandline-terminal sokoban solver written in Ada. It is "generic" in the sense that it contains no domain specific strategies. It also provides a demonstration of the incredible power of the Hungarian Algorithm. The proper command to extract the archive and maintain the directory structure is "7z x filename". -
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An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).
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Quine-McCluskey minimizer
simplifies boolean functions with Quine-McCluskey algorithm
Small console application written in C to simplify boolean functions with the Quine-McCluskey algorithm -
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A bignum library written in the C++ programming language as templates. It provides standard mathematical operations like add, sub, mul, div, pow etc. with the big integer and big floating point numbers.
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Carnaval est un logiciel destiné au calcul de masques et d'ensoleillement. La version actuelle permet de calculer les trajectoires solaires et les masques de terrain liés au relief (modèle issu des données SRTM). Les développements ont été repris par Sober Software. Merci de visiter ce site pour télécharger la dernière version et accéder aux nouvelles fonctionalités : www.sober-software.com
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COPEread
Connecting Overlapped Pair-End Reads
COPE (Connecting Overlapped Pair-End reads) is a method to align and connect the illumina sequenced Pair-End reads of which the insert size is smaller than the sum of the two read length.The connected reads can be used in genome assembly, resequencing and transcriptome research. The full citation: COPE: An accurate k-mer based pair-end reads connection tool to facilitate genome assembly Binghang Liu; Jianying Yuan; Siu-Ming Yiu; Zhenyu Li; Yinlong Xie; Yanxiang Chen; Yujian Shi; Hao Zhang; Yingrui Li; Tak-Wah Lam; Ruibang Luo Bioinformatics (2012) 28(22): 2870-2874; doi: 10.1093/bioinformatics/bts563 -
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Bandicoot
fast C++ library for GPU linear algebra & scientific computing
* Fast GPU linear algebra library (matrix maths) for the C++ language, aiming towards a good balance between speed and ease of use * Provides high-level syntax and functionality deliberately similar to Matlab * Provides an API that is aiming to be compatible with Armadillo for easy transition between CPU and GPU linear algebra code * Useful for algorithm development directly in C++, or quick conversion of research code into production environments * Distributed under the permissive Apache 2.0 license, useful for both open-source and proprietary (closed-source) software * Can be used for machine learning, pattern recognition, computer vision, signal processing, bioinformatics, statistics, finance, etc * Downloads: http://coot.sourceforge.io/download.html * Documentation: http://coot.sourceforge.io/docs.html * Bug reports: http://coot.sourceforge.io/faq.html * Git repo: https://gitlab.com/conradsnicta/bandicoot-code -
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Bin Packing with Genectic Algorithm
Bin Packing problem solved using Genectic Algorithm
This project contains a solution for a Bin Packing problem solved using Genectic Algorithms. The code in the project was created as a solution for a problem in a combinatorial optimization class at the Univeridade Federal do Rio Grande do Sul (UFRGS - Brasil) in 2007. -
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CADI is an implementation of the JPIP standard (JPEG2000 Interactive Protocol - Part 9). CADI includes a JPIP server, a JPIP proxy, and a JPIP Client. CADI is designed and programmed with the aim to provide a flexible framework to test and develop ne
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CrystalCMP
Easy-to-use tool for fast comparison of molecular packing
CrystalCMP is a code for comparing crystal structures. It is using two basic approaches for this purpose - the fingerprint and the RMSD approach. Result of the comparison is a similarity matrix and dendrogram. Read more here: J. Appl. Cryst. (2016). 49, 2172-2183 (https://doi.org/10.1107/S1600576716016058) and also here: J. Appl. Cryst. (2020). 53, 841-847 https://doi.org/10.1107/S1600576720003787 -
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Function Point Analysis
Progressive Function Point Analysis Workbook in Excel
Progressive Function Point Analysis Book Released: Print Copy: http://www.amazon.com/Progressive-Function-Point-Analysis-Estimation/dp/1502354160 EBook: http://www.amazon.com/dp/B00NH0MMAG Please support this project and its future releases ! Managers provide the architect/teams with project requirements. The architect/team returns detailed task list with estimated man hours per task making life easier for Project Managers with less guesstimates and proper business/technical process flows to justify estimates. Better Accountability: All work is accounted for in greater detail, ensuring payment. Task Bound: Every task identified and defined in a user story with well-planned set of functions Time Bound: Every task and user story has a pre-defined time limit for monitoring. Working Blueprint: Base design for development defined in Process steps. Team Involvement: Teams work together in counting process and thereby gain better insight into the project. -
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devFlowCharter is a complete environment for creating program flowchart, source code generation, and compilation. Its main goal is to be straightforward, educational tool for use during procedural programming classes.
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Base62 Encode/Decode Utility
A tool for encoding/decoding to base62
the package chewingum contains two main programs: - base62 - chew They have been implemented in perl. Base62 has been coded in c++ too. chew has been written to shorten long decimal integer numbers into base62 strings. It's not a mere base conversion, because it doesn't use arithmetic inside its logic. In this way it can convert very long numbers into strings quickly, without overflows. For example if I want to share an id using an url, this will make the url shorter. the base62 program has been written to encode/decode files into this format. The syntax is similar to the popular base64 command line program. Inside the package there is a working c++ version of the base62 algorithm. the sources are inside the package. Note that from release 2.0.0 the algorithm is different from the one used before. If you have coded a file using base62 < 2.0.0 DO NOT USE base62 >= 2.0.0 to decode it. The 2.0.1 release has a new algorithm for chew, we have a compat flag -
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Java·Applied·Geodesy·3D
Least-Squares Adjustment Software for Geodetic Sciences
JAG3D is no longer developed at source-forge, and has moved to GitHub. Please visit https://github.com/applied-geodesy/jag3d or https://software.applied-geodesy.org to get the latest version. -
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NeoBio is a Java class library of Computational Biology Algorithms. The current version consists mainly of pairwise sequence alignment algorithms such as the classical dynamic programming methods of Needleman-Wunsch and Smith-Waterman.
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OpenDino
Open Source Java platform for Optimization, DoE, and Learning.
OpenDino is an open source Java platform for optimization, design of experiment and learning. It provides a graphical user interface (GUI) and a platform which simplifies integration of new algorithms as "Modules". Implemented Modules Evolutionary Algorithms: - CMA-ES - (1+1)-ES - Differential Evolution Deterministic optimization algorithm: - SIMPLEX Learning: - a simple Artificial Neural Net Optimization problems: - test functions - interface for executing other programs (solvers) - parallel execution of problems - distributed execution of problems via socket connection between computers Others: - data storage - data analyser and viewer