Open Source Linux Data Science Tools - Page 2
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Data Science Tools for Linux
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Catbird Linux
Linux for content creation, web scraping, coding, and data analysis.
Catbird Linux is a USB pluggable Live Linux operating system built for media creation, web scraping, and software coding. It is the daily driver you want for retrieving data, making videos or podcasts, and making software tools to automate the repetitive tasks. It is ready for work in Python, Lua, and Go languages, with numerous packages for web scraping or downloading data via API calls. Using Catbird Linux, it is possible to accomplish in depth stock market analysis, track weather trends, follow social media sentiment, or do other tasks in data science. The system is programmer friendly, ready for creating and running the tools you use to measure and understand your world. In addition to search and GPT tools, you have what you need to take notes, write reports or presentations, record and edit audio or video. Under the hood, the system is tuned to be fast and responsive on modest equipment, with a real time kernel and lightweight tiling / tabbing window manager. -
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sadsa
SADSA (Software Application for Data Science and Analytics)
SADSA (Software Application for Data Science and Analytics) is a Python-based desktop application designed to simplify statistical analysis, machine learning, and data visualization for students, researchers, and data professionals. Built using Python for the GUI, SADSA provides a menu-driven interface for handling datasets, applying transformations, running advanced statistical tests, machine learning algorithms, and generating insightful plots — all without writing code. -
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AWS SDK for pandas
Easy integration with Athena, Glue, Redshift, Timestream, Neptune
aws-sdk-pandas (formerly AWS Data Wrangler) bridges pandas with the AWS analytics stack so DataFrames flow seamlessly to and from cloud services. With a few lines of code, you can read from and write to Amazon S3 in Parquet/CSV/JSON/ORC, register tables in the AWS Glue Data Catalog, and query with Amazon Athena directly into pandas. The library abstracts efficient patterns like partitioning, compression, and vectorized I/O so you get performant data lake operations without hand-rolling boilerplate. It also supports Redshift, OpenSearch, and other services, enabling ETL tasks that blend SQL engines and Python transformations. Operational helpers handle IAM, sessions, and concurrency while exposing knobs for encryption, versioning, and catalog consistency. The result is a productive workflow that keeps your analytics in Python while leveraging AWS-native storage and query engines at scale. -
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AWS Step Functions Data Science SDK
For building machine learning (ML) workflows and pipelines on AWS
The AWS Step Functions Data Science SDK is an open-source library that allows data scientists to easily create workflows that process and publish machine learning models using Amazon SageMaker and AWS Step Functions. You can create machine learning workflows in Python that orchestrate AWS infrastructure at scale, without having to provision and integrate the AWS services separately. The best way to quickly review how the AWS Step Functions Data Science SDK works is to review the related example notebooks. These notebooks provide code and descriptions for creating and running workflows in AWS Step Functions Using the AWS Step Functions Data Science SDK. In Amazon SageMaker, example Jupyter notebooks are available in the example notebooks portion of a notebook instance. To run the AWS Step Functions Data Science SDK example notebooks locally, download the sample notebooks and open them in a working Jupyter instance. -
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Adele
Adhoc Data Exploration - Live & Easy
Adele was developed to simplify the daily work with data. Use it as a swiss knife to fill the gap between your work with spreadsheet application like MS Excel and enterprise servers like SAP ERP. Specialized tools like Rapid Miner, KNIME or similiary stuff should not be replaced. But Adele is designed for business people working with spreadsheet applications to analyse their data. There are many technical concepts in an easier way included. For example realtime OLAP, transformations, charts, analysis tools,... Connectors (e.g. JDBC, SAP ABAP, OData) can be used to pre-analyse the data and extract it without saving the data as text files. A plugin concept for enhancements are available. Enjoy! Its free for commercial use too. Adele runs without installation from USB stick for Windows, Linux and MacOSX. Last added changes: - data science tools (V1, IQR) - export to remote and desktop databases (mysql,sqlite, ms access) - internet features for emails and domains -
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Amazon SageMaker Examples
Jupyter notebooks that demonstrate how to build models using SageMaker
Welcome to Amazon SageMaker. This projects highlights example Jupyter notebooks for a variety of machine learning use cases that you can run in SageMaker. If you’re new to SageMaker we recommend starting with more feature-rich SageMaker Studio. It uses the familiar JupyterLab interface and has seamless integration with a variety of deep learning and data science environments and scalable compute resources for training, inference, and other ML operations. Studio offers teams and companies easy on-boarding for their team members, freeing them up from complex systems admin and security processes. Administrators control data access and resource provisioning for their users. Notebook Instances are another option. They have the familiar Jupyter and JuypterLab interfaces that work well for single users, or small teams where users are also administrators. Advanced users also use SageMaker solely with the AWS CLI and Python scripts using boto3 and/or the SageMaker Python SDK. -
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Awesome Fraud Detection Research Papers
A curated list of data mining papers about fraud detection
A curated list of data mining papers about fraud detection from several conferences. -
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DEPRECATED - KVFinder
Cavity Detection PyMOL plugin
The KVFinder software, originally published in 2014, is deprecated. We published more recent software: parKVFinder and pyKVFinder. [parKVFinder] A Linux/macOS version is available in this GitHub repository, https://github.com/LBC-LNBio/parKVFinder, while a Windows version is in this GitHub repository, https://github.com/LBC-LNBio/parKVFinder-win. Please read and cite the original paper ParKVFinder: A thread-level parallel approach in biomolecular cavity detection (10.1016/j.softx.2020.100606). [pyKVFinder] pyKVFinder is available in this Python Package Index (PyPI) repository, https://pypi.org/project/pyKVFinder and this GitHub repository, https://github.com/LBC-LNBio/pyKVFinder. Please read and cite the original paper pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science (10.1186/s12859-021-04519-4). -
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Data Science at the Command Line
Data science at the command line
Command Line by Jeroen Janssens, published by O’Reilly Media in October 2021. Obtain, scrub, explore, and model data with Unix Power Tools. This repository contains the full text, data, and scripts used in the second edition of the book Data Science at the Command Line by Jeroen Janssens. This thoroughly revised guide demonstrates how the flexibility of the command line can help you become a more efficient and productive data scientist. You’ll learn how to combine small yet powerful command-line tools to quickly obtain, scrub, explore, and model your data. To get you started, author Jeroen Janssens provides a Docker image packed with over 100 Unix power tools, useful whether you work with Windows, macOS, or Linux. You’ll quickly discover why the command line is an agile, scalable, and extensible technology. Even if you’re comfortable processing data with Python or R, you’ll learn how to greatly improve your data science workflow by leveraging the command line’s power. -
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Deep Learning course
Slides and Jupyter notebooks for the Deep Learning lectures
Slides and Jupyter notebooks for the Deep Learning lectures at Master Year 2 Data Science from Institut Polytechnique de Paris. This course is being taught at as part of Master Year 2 Data Science IP-Paris. Note: press "P" to display the presenter's notes that include some comments and additional references. This lecture is built and maintained by Olivier Grisel and Charles Ollion. -
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Deep Learning with PyTorch
Latest techniques in deep learning and representation learning
This course concerns the latest techniques in deep learning and representation learning, focusing on supervised and unsupervised deep learning, embedding methods, metric learning, convolutional and recurrent nets, with applications to computer vision, natural language understanding, and speech recognition. The prerequisites include DS-GA 1001 Intro to Data Science or a graduate-level machine learning course. To be able to follow the exercises, you are going to need a laptop with Miniconda (a minimal version of Anaconda) and several Python packages installed. The following instruction would work as is for Mac or Ubuntu Linux users, Windows users would need to install and work in the Git BASH terminal. JupyterLab has a built-in selectable dark theme, so you only need to install something if you want to use the classic notebook interface. -
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DeepLearningProject
An in-depth machine learning tutorial
This tutorial tries to do what most Most Machine Learning tutorials available online do not. It is not a 30 minute tutorial that teaches you how to "Train your own neural network" or "Learn deep learning in under 30 minutes". It's a full pipeline which you would need to do if you actually work with machine learning - introducing you to all the parts, and all the implementation decisions and details that need to be made. The dataset is not one of the standard sets like MNIST or CIFAR, you will make you very own dataset. Then you will go through a couple conventional machine learning algorithms, before finally getting to deep learning! In the fall of 2016, I was a Teaching Fellow (Harvard's version of TA) for the graduate class on "Advanced Topics in Data Science (CS209/109)" at Harvard University. I was in charge of designing the class project given to the students, and this tutorial has been built on top of the project I designed for the class. -
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FlexiList.
FlexiList is a Java data structure that combines the benefits of array
FlexiList is a Java data structure that combines the benefits of arrays and linked lists. Like an array, it allows for efficient access to elements by index. Like a linked list, it allows for efficient insertion and deletion of elements at any position in the list. Benefits Over Arrays and ArrayList ->Efficient Insertion and Deletion: FlexiList can insert or delete nodes at any position in the list in O(1) time, whereas arrays require shifting all elements after the insertion or deletion point. ->Dynamic Size: FlexiList can grow or shrink dynamically as elements are added or removed, whereas arrays have a fixed size. ->Good Memory Locality: FlexiList nodes are stored in a contiguous block of memory, making it more cache-friendly than arrays. ->Faster Insertion and Deletion: FlexiList can insert or delete nodes at any position in the list in O(1) time, whereas ArrayList requires shifting all elements after the insertion or deletion point. -
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Forecasting Best Practices
Time Series Forecasting Best Practices & Examples
Time series forecasting is one of the most important topics in data science. Almost every business needs to predict the future in order to make better decisions and allocate resources more effectively. This repository provides examples and best practice guidelines for building forecasting solutions. The goal of this repository is to build a comprehensive set of tools and examples that leverage recent advances in forecasting algorithms to build solutions and operationalize them. Rather than creating implementations from scratch, we draw from existing state-of-the-art libraries and build additional utilities around processing and featuring the data, optimizing and evaluating models, and scaling up to the cloud. The examples and best practices are provided as Python Jupyter notebooks and R markdown files and a library of utility functions. -
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Metaflow
A framework for real-life data science
Metaflow is a human-friendly Python library that helps scientists and engineers build and manage real-life data science projects. Metaflow was originally developed at Netflix to boost productivity of data scientists who work on a wide variety of projects from classical statistics to state-of-the-art deep learning. -
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NVIDIA Merlin
Library providing end-to-end GPU-accelerated recommender systems
NVIDIA Merlin is an open-source library that accelerates recommender systems on NVIDIA GPUs. The library enables data scientists, machine learning engineers, and researchers to build high-performing recommenders at scale. Merlin includes tools to address common feature engineering, training, and inference challenges. Each stage of the Merlin pipeline is optimized to support hundreds of terabytes of data, which is all accessible through easy-to-use APIs. For more information, see NVIDIA Merlin on the NVIDIA developer website. Transform data (ETL) for preprocessing and engineering features. Accelerate your existing training pipelines in TensorFlow, PyTorch, or FastAI by leveraging optimized, custom-built data loaders. Scale large deep learning recommender models by distributing large embedding tables that exceed available GPU and CPU memory. Deploy data transformations and trained models to production with only a few lines of code. -
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NuzeBot
Finds interesting news headlines.
This is a bot to finds the news you want to see. It can be made to find the news that interests you and reject everything else. View on one page the most interesting headlines from many websites. -
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OGLDataScienceTool
Opengl tool for data science visualization
Data visualization tool written in LWJGL Compatible with libgdx and other opengl wrappers The project depends on apache poi, and apache commons, for office files support Planned features for next release: * reading json, and other nosql data structures * jdbc connection for creating dataframes * data heatmaps, and additional plots for questions, contact me kumar.santhi1982@hotmail.com more details: http://www.java-gaming.org/topics/ds/41920/view.html http://datascienceforindia.com/ -
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Orchest
Build data pipelines, the easy way
Code, run and monitor your data pipelines all from your browser! From idea to scheduled pipeline in hours, not days. Interactively build your data science pipelines in our visual pipeline editor. Versioned as a JSON file. Run scripts or Jupyter notebooks as steps in a pipeline. Python, R, Julia, JavaScript, and Bash are supported. Parameterize your pipelines and run them periodically on a cron schedule. Easily install language or system packages. Built on top of regular Docker container images. Creation of multiple instances with up to 8 vCPU & 32 GiB memory. A free Orchest instance with 2 vCPU & 8 GiB memory. Simple data pipelines with Orchest. Each step runs a file in a container. It's that simple! Spin up services whose lifetime spans across the entire pipeline run. Easily define your dependencies to run on any machine. Run any subset of the pipeline directly or periodically. -
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SageMaker Containers
Create SageMaker-compatible Docker containers
Amazon SageMaker is a fully managed service for data science and machine learning (ML) workflows. You can use Amazon SageMaker to simplify the process of building, training, and deploying ML models. To train a model, you can include your training script and dependencies in a Docker container that runs your training code. A container provides an effectively isolated environment, ensuring a consistent runtime and reliable training process. The SageMaker Training Toolkit can be easily added to any Docker container, making it compatible with SageMaker for training models. If you use a prebuilt SageMaker Docker image for training, this library may already be included. Very often, an entry point needs additional information from the container that is not available in hyperparameters. SageMaker Containers writes this information as environment variables that are available inside the script. -
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SageMaker Inference Toolkit
Serve machine learning models within a Docker container
Serve machine learning models within a Docker container using Amazon SageMaker. Amazon SageMaker is a fully managed service for data science and machine learning (ML) workflows. You can use Amazon SageMaker to simplify the process of building, training, and deploying ML models. Once you have a trained model, you can include it in a Docker container that runs your inference code. A container provides an effectively isolated environment, ensuring a consistent runtime regardless of where the container is deployed. Containerizing your model and code enables fast and reliable deployment of your model. The SageMaker Inference Toolkit implements a model serving stack and can be easily added to any Docker container, making it deployable to SageMaker. This library's serving stack is built on Multi Model Server, and it can serve your own models or those you trained on SageMaker using machine learning frameworks with native SageMaker support. -
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Seldon Server
Machine learning platform and recommendation engine on Kubernetes
Seldon Server is a machine learning platform and recommendation engine built on Kubernetes. Seldon reduces time-to-value so models can get to work faster. Scale with confidence and minimize risk through interpretable results and transparent model performance. Seldon Core focuses purely on deploying a wide range of ML models on Kubernetes, allowing complex runtime serving graphs to be managed in production. Seldon Core is a progression of the goals of the Seldon-Server project but also a more restricted focus to solving the final step in a machine learning project which is serving models in production. Seldon Server is a machine learning platform that helps your data science team deploy models into production. It provides an open-source data science stack that runs within a Kubernetes Cluster. You can use Seldon to deploy machine learning and deep learning models into production on-premise or in the cloud (e.g. GCP, AWS, Azure). -
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TensorFlow.NET
.NET Standard bindings for Google's TensorFlow for developing models
TensorFlow.NET (TF.NET) provides a .NET Standard binding for TensorFlow. It aims to implement the complete Tensorflow API in C# which allows .NET developers to develop, train and deploy Machine Learning models with the cross-platform .NET Standard framework. TensorFlow.NET has built-in Keras high-level interface and is released as an independent package TensorFlow.Keras. SciSharp STACK's mission is to bring popular data science technology into the .NET world and to provide .NET developers with a powerful Machine Learning tool set without reinventing the wheel. Since the APIs are kept as similar as possible you can immediately adapt any existing TensorFlow code in C# or F# with a zero learning curve. Take a look at a comparison picture and see how comfortably a TensorFlow/Python script translates into a C# program with TensorFlow.NET. -
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cuDF
GPU DataFrame Library
Built based on the Apache Arrow columnar memory format, cuDF is a GPU DataFrame library for loading, joining, aggregating, filtering, and otherwise manipulating data. cuDF provides a pandas-like API that will be familiar to data engineers & data scientists, so they can use it to easily accelerate their workflows without going into the details of CUDA programming. For additional examples, browse our complete API documentation, or check out our more detailed notebooks. cuDF can be installed with conda (miniconda, or the full Anaconda distribution) from the rapidsai channel. cuDF is supported only on Linux, and with Python versions 3.7 and later. The RAPIDS suite of open-source software libraries aims to enable the execution of end-to-end data science and analytics pipelines entirely on GPUs. It relies on NVIDIA® CUDA® primitives for low-level compute optimization but exposing that GPU parallelism and high-bandwidth memory speed through user-friendly Python interfaces.
