Search Results for "hydrogen"
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Showing 37 open source projects for "hydrogen"
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Hydrogen
An advanced drum machine with pattern-based programming
Hydrogen is an advanced drum machine for GNU/Linux, Windows and Mac OS X. It's main goal is to bring professional yet simple and intuitive pattern-based drum programming. -
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Hydrogen
Run code interactively, inspect data, and plot
Hydrogen is an interactive coding environment that supports Python, R, JavaScript and other Jupyter kernels. Hydrogen was inspired by Bret Victor's ideas about the power of instantaneous feedback and the design of Light Table. Running code inline and in real-time is a more natural way to develop. By bringing the interactive style of Light Table to the rock-solid usability of Atom, Hydrogen makes it easy to write code the way you want to. You also may be interested in our latest project... -
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Hydrogen Bond Analysis Tool (HBAT)
HBAT v2 is migrated from PERL to Python.
HBAT(Hydrogen Bond Analysis Tool) is a tool to automate the analysis of hydrogen bonds present in a PDB Structure file. HBAT v2 is migrated from PERL to Python. Latest Documentation: https://hbat.abhishek-tiwari.com/ Latest Github Release: http://github.com/abhishektiwari/hbat Citation: Tiwari, A., & Panigrahi, S. K. (2007). HBAT: A Complete Package for Analysing Strong and Weak Hydrogen Bonds in Macromolecular Crystal Structures. In Silico Biology, 7(6). https://doi.org/10.3233/ISI... -
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HomotopyContinuation.jl
A Julia package for solving systems of polynomials
.... An example of an non-algebraic objective function whose derivative is algebraic is the Kullback–Leibler divergence. Homotopy continuation methods allow us to study the conformation space of molecules as for example cyclooctane (CH₂)₈. This molecule consists of eight carbon atoms aligned in a ring, and eight hydrogen atoms, each of which is attached to one of the carbon atoms. -
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Hex
Hydrogen-Electron Collisions
A computer code for simulation of electron-hydrogen scattering. Contains three (more or less) finished sub-programs: (a) “hex-ecs” which solves the Schrödinger equation in the B-spline basis, (b) “hex-dwba” which computes scattering variables for high energies using the distorted wave Born approximation of the first order and finally (c) “hex-db” which is a user interface to a plain SQLite database, where the intermediate results are being stored, and which is used to extract derived... -
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We developed IBEIP, an intelligent and accurate tool for identifying B cell dominant epitope regions based on Ag-nAb complex crystal structures from PDB database. During epitope mapping, IBEIP analyzes four molecular interactions (van der Waals forces, buried surface area, hydrogen bonds, and electrostatic interactions) between antigen and antibody complexes to ensure accuracy. IBEIP uses a hierarchical iterative merging model to merge highly overlapping epitopes and identify the hot nAb...
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Pearl Studio 9
A Loaded Recording Studio Out of the box
64 bit LTS OS running the 5.4 kernel. -
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Pearl MATE STUDIO 7.1
Ready to go Professional Multitrack Recording by MixBus on MATE
This release features the new MixBus multitrack recording software that turnes your Linux Desktop into a full featured audio recording studio. Based on 64 bit Pearl MATE 7 series (18.04 LTR), Finally professional software used by the pros on Linux for everyone. Harrison MixBus software is based on the popular Ardour Multitrack Open Source Software. This version is the demo version. ALSA and JACK support. Candence handles the seamless use of Pulseaudio for such software like Firefox... -
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The openFuelCell project is a forum to develop open source computational fluid dynamics (CFD) software to model fuel cells. Fuel cells http://en.wikipedia.org/wiki/Fuel_cell are devices that convert hydrogen and oxygen to water and electricity, and are promising renewable energy conversion devices. Computational fluid dynamics tools are used to size and rate fuel cell systems. OpenFoam is an open source CFD toolbox, available for downloading at http://www.openfoam.com/, written in C...
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Photo and Video Editing APIs and SDKsUnlock Picsart's full editing suite by embedding our Editor SDK directly into your platform. Offer your users the power of a full design suite without leaving your site.
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📝 MIUI Evolution is a project developed by Gerimis and Kenzo ID Team. 📝 Porting MIUI Nougat from device Hydrogen (Mi Max) or Helium (Mi Max Prime) to Kenzo (Redmi Note 3 Pro) 📌 Website: http://bit.ly/MIUI-Evolution 🍺 Special Thanks: 👤 Mank Abo 👤 Mr. Jopra 👤 Sego Pecel 👤 Badroen Solo 👤 Ezhasuke 👤 M. Taupik 👤 Turaturu 👤 Eni Wulandari 👤 Vickry 👤 Eka Restu A Putra 👤 BadjinganGuy 👤 Khusnan 👤 Bian 👤 Mon's Semar Mesem 👤 MIUI Kenzo ID Team 👤 MiFans
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AmberAnalysis
Command-line tools for analyzing Amber Molecular Dynamics simulations.
A suite of command-line tools for analyzing chemically relevant features of an Amber Molecular Dynamics simulation. Can detect the position of a planar interface between two substances and plot density relative to that interface for atoms of an arbitrary type, name, charge, or residue. Orientation of three-atom residues (such as water) may be calculated and plotted. Uses parallel processing to detect hydrogen bonds, and can produce a bonding profile. Output files can be displayed as graphs... -
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Pearl Linux 3.5
OS X Alternative that installs on most new or old computers
The complete OS X styled operating system ready to go with the best open source software available today. Pearl Linux 3.5 32 bit will install on most new and used desktops, laptops, notebooks and netbooks. All of the Pearl Linux releases are modeled from Mac OS X Snow Leopard addition. Newer OS X styles available through theming. Customize this super stable feature packed Mac OS X styled system with compiz desktop effects with both dark and light themes, Nitrogen to change your HD... -
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ddtFoam
OpenFOAM solver to simulate the deflagration-to-detonation transition
This solver represents an addition to the open-source CFD package OpenFOAM. The solver is used to simulate the deflagration-to-detonation transition in hydrogen-air mixtures. Prominent features are described below. Additional description is available in the pdf file included. For a more detailed description download Florian Ettner's thesis (in German) from http://www.td.mw.tum.de/tum-td/de/forschung/dissertationen/download/I2013/Ettne13.pdf [8.6 MB] A shorter description... -
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bnf2xml
simple BNF parser makes xml markup of matches
bnf2xml a simple BNF parser that takes text as input, searches according to a BNF query file, and outputs text marked up by the xml labels that show context. bnf2xml is as simple to use as any text binary ie, awk(1) grep(1). bnf2xml does not require C API because it outputs simple xml labeling. README is visible on file dl page. EXAMPLE: $ echo "hi" | bnf2xml patternfile <word><alph>h</alph><alph>i</alph></word> or <gas>hydrogen iodide</gas> patternfile says how to find... -
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Rockband Pro-Drumkit midi driver
Package to use RockBand 3 Pro Drumkit and Guitar Hero drumkit via midi
FOR LATEST VERSION GO TO https://github.com/rbdrum2midi/rbdrum2midi This userland program uses libusb to gain access to the velocity sensitive data in the rockband 3 wireless usb prodrum controller (with cymbals) and Guitar Hero drumkit and use it as an ALSA MIDI controller. It has a low latency setup so that it can give a fairly good drumming experience. -
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Fluid Gravity 3way
there are 3 observers to every curve, each seeing the other 2
I recently dug up some of my old simulations after to my surprise 3SAT and a theoretical expansion of boltzmann statistics reminded me I already simulated something like that but I didnt know how good a simulation it was. Check how the varying density and shape of electron clouds and soliton-like or fluid drop like blobs of field gradually start to point outward and get thinner, like a soliton is bell curve shaped as seen from outside. More importantly, compare the 2 halfs of electron cloud... -
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Bingul Project
Bingul project is for Tubitak Electrical and Hydrogen Cars
Bingul project includes embedded and c++ files to control and monitor remote car datas at racing. Usually most of team have not got a communication system so i believe this project solve them problems. -
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binana
BINANA (BINding ANAlyzer) is a python-implemented algorithm for analyz
BINANA (BINding ANAlyzer) is a python-implemented algorithm for analyzing ligand binding. The program identifies key binding characteristics like hydrogen bonds, salt bridges, and pi interactions. As input, BINANA accepts receptor and ligand files in the PDBQT format. PDBQT files can be generated from the more common PDB file format using the free converter provided with AutoDockTools. As output, BINANA describes ligand binding. NOTE: The latest version of BINANA is now hosted at http... -
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SBION2
Analyses of Salt Bridges from Multiple Structure Files, Version 2
Program: SBION2- Analyses of Salt Bridges from Multiple Structure Files, Version:--v2.0 - improved version of SBION: Gupta et al Bioinformation, 10, 164-166, 2014 Author:c)--Parth Sarthi Sen Gupta, Arnab Nayek, Shyamashree Banerjee, Pratyay Seth, Vishma Pratap Sur, Sunit Das,Chittran Roy and Amal Kumar Bandyopadhyay; Department of Biotechnology,The University of Burdwan, India -
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QUDeX-MS
Hydrogen/deuterium exchange estimation for isotopic fine structure MS
Hydrogen-deuterium exchange coupled to mass spectrometry permits analysis of structural dynamics, stability, and molecular interactions of proteins. Resolving isotopic fine structure during mass spectrometry has been recently demonstrated to allow direct detection and quantification of deuterium incorporation distinct from peaks corresponding to non-deuterium incorporated natural abundance heavy isotopomers. Here, we present a graphical tool that allows for a rapid and automated estimation... -
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PyInteraph
analysis of interaction networks in structural ensembles of proteins
PyInteraph is a software research tool for the analysis of structural communication protein ensembles. It has been designed to analyze MD and structural ensembles with attention to binary interactions between residues, such as hydrogen bonds, salt bridges, and hydrophobic interactions. Once the interactions have been calculated, it is able to use different classes of intra- and intermolecular interactions, combined or alone, to calculate comprehensive interaction graphs. These graphs can... -
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Tango Studio is a Debian-based Linux distribution featuring a large collection of free and open-source software for sound, video and graphics editing and creation. It's an optimized and pre-configured system for wishing zicos produce, create and record without taking the head !!!
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Galactus
A neutral hydrogen galaxy modeling and fitting tool
Galactus is a new astronomical modeling package. The aim is to model and fit datacubes from radio synthesis telescopes. Galactus is the only HI tool which can predict the HI (self-)absorption. -
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MAYA STUDIO 13.07-32bit
Linux Mint based A/V-System
MAYA STUDIO is an optimized Linux System with a lot of applications for Audio/Video and Photo-Production based on Ubuntu 12.04/Linux Mint 13 with Mate-Desktop! It was designed for older hardware, netbooks and modern hardware as well. First focus is stability, compability and an user-friendly Linux-Environment to be creative. Special feature: Maya Studio uses ALSA as the default soundsystem without Pulse and comes with the Jack Sound Server as an advanced option for professional...