Open Source C Simulation Software - Page 10

ParamIT is a toolkit aiding the development of molecular mechanical force field parameterization of small, drag like, molecules within CHARMM general force field (CGenFF) protocol. The developed toolkit helps the researchers in following ways: 1) automating the creation of multiple input files for quantum and molecular mechanics programs, 2) automating the output analysis and 3) substitute the use of full MM programs with a faster specialized one. The developed tools include: 1) generator of molecule-water complexes with graphical user interface (GUI), 2) semi-automatic frequency analysis using symbolic potential energy distribution matrix and comparison of optimized internal coordinates, 3) GUI for charge fitting with three modes: manual, Monte-Carlo sampling or brute force, and 4) GUI for dihedral terms fitting. The usage of these tools decreases the labor effort, lowers manual input errors and reduces the time needed for accurate MM parameterization efforts.

ParsNIP takes the ascii PTRAC files produced with MCNP radiation transport code and parses into a one-line = one-event format which can then be further processed in MATLAB, Excel etc. if necessary.

Penacho calculates and draws the gas dispersion of a smokestack in the atmosphere. The plume evolution and the pollutant concentration distribution over the surrounding area can be seen in an interactive 3D graph.

Phoinix is a Nintendo Gameboy emulator for the Palm Computing Platform. It converts your business handheld into a fun machine.

Photonics is a photon tracking Monte Carlo package, which calculates photon flux and time distributions in a heterogeneous medium surrounding a light source. The propagation medium and detector and light sources are highly customizable.

The Physicist is a high end physics simulation engine that can provide answers with reasonable accuracies(now w/ rk4 and euler options). It can currently predict the motion of many particles.It Employs OpenGL to provide cutting edge graphics support.

User interactive Microchip PIC simulator.

This project contains the sources for the simulation codes used within ESA's Planck mission (http://sci.esa.int/planck/)

Plouf is a set of algorithms that solve partial differential equations on sets of connected points. Emphasis is on fluid mechanics and plasma flows.

PAL used in scnerios of the production environment

The project implements Protein Folding on a CBE. The role of water on folding under different environments is studied through visualization results. It acts as a tool to visualize the folding of an amino acid sequence into a 3D protein structure.

Pydusa is a package for parallel programming using Python. It contains a module for doing MPI programming in Python. We have added parallel solver packages such as Parallel SuperLU for solving sparse linear systems.

QSMM, a recursive acronym for "QSMM State Machine Model", is a framework for learning finite automatons that perform goal-directed interaction with entities which exhibit deterministic or stochastic behavior. The learning process can be carried out in real time together with the interaction process. A basic building block for supporting state models of finite automatons is adaptive probabilistic mapping, which for an argument from its domain returns more often results that maximize or minimize values of one or more objective functions. Finite automatons can be represented by assembler programs with user-defined instructions that perform effective work. To assist in the learning of a finite automaton, a template for its state model can be provided as an assembler program with probabilistic jump instructions. The operating principle behind the framework resembles the Boltzmann machine.

UPDATE: ----------- This repository is no longer maintained, the new version of the QSS Solver is available at: https://github.com/CIFASIS/qss-solver

A modern and usable interface for the well known neuronal network simulator SNNS. The GUI acts as a client to serveral servers embedding SNNS and supports team work aspects.

RANGE: produce random genetic transcription networks in the NEMO language, which when compiled outputs models in Systems Biology Markup Language. Generate synthetic microarray data, or use NEMO alone to SBML-ize a network, or visualize it in cytoscape.

RHESSys is a GIS-based, hydro-ecological modeling framework designed to simulate carbon, water, and nutrient fluxes.

RYUON : many-particle simulation suite

A soft-real-time hardware-in-the-loop simulation framework utilizing SysV IPC and Glade/GTK user interface. For demonstration purposes, includes an implementation of a fixed timestep dynamic simulation of a power grid.

The Regional Urban Growth Model (RUG). RUG Development Team c/o Todd BenDor Department of City and Regional Planning University of North Carolina at Chapel Hill CB #3140, New East Building Chapel Hill, NC 27599-3140 bendor AT unc.edu

Rensselaer's Optimistic Simulation System, or ROSS, is a parallel discrete event simulator employing optimistic synchronization for multiple processors. ROSS has demonstrated scalability to 131,072 processors. ROSS implements reverse computation.

Program tworzony w ramach przedmiotu "Projekt Grupowy" na Politechnice Gdańskiej. Skład: inż. Adam Banaś inż. Maciej Gajdzica inż. Adam Lasota inż. Damian Pawlus inż. Włodzimierz Kaoka Opiekun projektu: mgr inż. Piotr Fiertek Celem projektu jest stworzenie środowiska symulacyjnego dla procesów termicznych zachodzących w pomieszczeniach. Integralną jego częścią jest implementacja algorytmów obliczeniowych na procesorach graficznych GPU przy użyciu standardów CUDA oraz OpenCL. Innymi ważnymi elementami są graficzna wizualizacja wyników z wykorzystaniem biblioteki graficznej OpenGL oraz stworzenie interfejsu użytkownika umożliwiającego zmianę parametrów symulacji.

Ruby-Newton is a Ruby wrapper for the NewtonGameDynamics physics engine ( http://newtondynamics.com/ ) It brings object-oriented real-time animated physics simulations to Ruby-enabled applications (e.g. 3D modeling tool with interactive scripting support

SCS is a smart car simulator. It build a virtual envirement according to the rules of the National University "The Freescale Cup" Smart Car Racing. SCS simulate the track and the car. SCS is based on ODE and OpenGL.

Integrated environment for the modelling and simulation of process control systems, where the plant(s) are described according to the Modelica object-oriented paradigm, while the control systems are specified in an IEC 61131.3-compliant language.