Compare the Top Payroll Software for Linux as of November 2025

What is Payroll Software for Linux?

Payroll software helps businesses automate the payment of salaries and wages to their employees. It is used to calculate and process payroll payments, manage employee information, and generate reports. It is a convenient and efficient way to ensure that employees are paid on time and accurately. Payroll software typically includes features for generating paychecks, direct deposit, tax filings, generating year-end tax forms (such as W-2s), and maintaining accurate payroll records. Additionally, many payroll software solutions integrate with time-tracking systems, HR management tools, and accounting software to simplify overall business operations and ensure accuracy in payroll processing. Compare and read user reviews of the best Payroll software for Linux currently available using the table below. This list is updated regularly.

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    Hubstaff

    Hubstaff

    Hubstaff

    Hubstaff is a time tracking software that helps teams log hours, monitor productivity, and automate payments — whether remote, hybrid, in-office, or field-based. Available on desktop, web, and mobile, Hubstaff enables employees to track time against specific tasks and projects from anywhere. Managers get built-in visibility through app and URL usage data, activity rates, and optional screenshots — all configurable by user role. Designed for global, growing and distributed teams, Hubstaff includes built-in productivity monitoring and workforce analytics to help businesses analyze how time is spent, identify inefficiencies, and improve performance — without micromanagement.
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    Starting Price: $4.99/user/month
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  • 2
    NolaPro

    NolaPro

    Noguska

    NolaPro is a robust, Linux-based ERP for Accounting, Order Tracking, Inventory Management & Payroll, designed to rival much more expensive choices. It is fully customizable and scalable for any size business, unlike any accounting program available today. The Cloud version allows a "hands-off" approach, but can be downloaded on Linux or Windows platforms for those who prefer to have local control and security. Features include: Credit Card Processing, Fulfillment & Service Order, AP, AR, Inventory, CRM, General Ledger, Payroll, Timeclock, Client Payment Portal and integration with many 3rd party apps -- or request your own! NolaPro is multi-lingual, supports multi-currency, offers tons of options & add-ons, and comes fully loaded with over 150 standard reports. A+ reviews from TechRepublic, The Linux Journal, Entrepreneur Magazine and CNet agree that NolaPro provides flexibility, features and pricing which provide you unparalleled value in managing your business.
    Starting Price: $0
  • 3
    QuickBooks Online
    QuickBooks Online is the most popular accounting software in the world. QuickBooks Online makes accounting easy. Make tracking receipts, income, bank transactions, and more feel simple with the #1 small business accounting software. Snap photos of your receipts and link them to expenses right from your phone. Our agents are ready and available to answer all your QuickBooks questions. Use the apps you know and love to keep your business running smoothly. QuickBooks Online works on your PC, Mac, tablets, and phones. Click the link above to get a 30 day free trial and 50% off your first 3 months. More than accounting software. QuickBooks helps you track income, expenses, and stay ready for taxes. Customers find on average $3,534 in tax savings per year. Need more help? QuickBooks Live helps you stay organized and be ready for tax time. QuickBooks comes with a mobile app that help you run your business on the go—anytime, anywhere.
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    Starting Price: $9/month (normally $15/month)
  • 4
    BrightHR

    BrightHR

    BrightHR

    If you are looking for a quick, easy and highly efficient way to manage your staff and simplify your business processes, look no further than Bright HR. We've been on a mission to transform people management for employers since 2015 with our range of innovative health and safety and HR software products making your working life so much easier. From holiday and sickness management to payroll, clocking in and much more, we provide HR, Health and Safety and business support to over 90,000 businesses globally. Trade the filing cabinet for a fully digital approach. Our web based products are all supported by our brilliant UK customer service team who guide you every step of the way to ensure you get the most out of our software and apps. Written by legal experts, our HR software includes everything you need to simply manage your team all in one place, PLUS free tools to set your business apart. Utilise us now - and engage your team in the process.
  • 5
    Factorial

    Factorial

    Factorial

    Factorial is a cloud-based business management software built specifically to empower small and medium-sized businesses. It’s not just an HR tool—it’s a comprehensive employee management software that combines automation, data, and a people-first approach to help companies scale with confidence. Track employee working hours, manage shifts, approve time off, and visualize workloads. Our cloud business management software integrates time tracking directly with payroll and project management to eliminate manual entry and errors. From sick leave to unlimited PTO policies, Factorial simplifies leave tracking through automated approval workflows, custom policy creation, and team-wide calendar visibility. It’s no surprise we were ranked the #1 PTO Tracker of 2025. From applicant tracking to onboarding, from performance reviews to training plans—Factorial supports the full employee lifecycle. Build strong, engaged teams and scale faster without needing multiple disconnected tools.
    Starting Price: $8/month/user
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    CARDZ3N

    CARDZ3N

    CARDZ3N

    CARDZ3N supports global payments for credit cards, ACH, SEPA, and Crypto (140+ coins). CARDZ3N processes payments for emerging markets & high-risk businesses, including CBD, crypto exchanges, gambling, travel, and more. We also offer a Stripe Alternative with rates starting at 2.25% for non-profits & 2.75% & $0.25 for e-commerce. CARDZ3N also offers other payment options, such as ACH, payroll and HR, benefits, or business capital. CARDZ3N Our mission is to solve the most pressing problems facing our clients, large and small. Our unique approach is what distinguishes us and what makes us different. We offer a wide range of services and solutions that help organizations achieve their vision, facilitate change, and maximize performance and productivity.
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    DailyPay

    DailyPay

    DailyPay

    DailyPay, powered by its industry-leading technology platform, is on a mission to build a new financial system. Partnering with America's best-in-class employers, including Dollar Tree, Berkshire Hathaway and Adecco, DailyPay is the recognized gold-standard in on-demand pay. Through its massive data network, proprietary funding model and connections into over 6,000 endpoints in the banking system, DailyPay works to ensure that money is always in the right place at the right time for employers, merchants and financial institutions. DailyPay is building technology and the mindset to reimagine the way money moves, from the moment work starts. DailyPay is headquartered in New York City, with operations based in Minneapolis.
    Starting Price: Free
  • 8
    Finally

    Finally

    Finally

    Finally is your all-in-one accounting solution, combining intelligent AI powered software with expert support to manage your business finances effortlessly. Designed for small and medium-sized businesses, Finally offer solutions for bookkeeping, taxes, payroll, expense tracking, and corporate credit cards, along with expert support to help you stay on top of your finances. We take the hassle out of financial management, keeping you organized, saving you time, and helping you avoid costly IRS penalties. With Finally, you get both the tools and the service you need to focus on growing your business with confidence.
    Starting Price: $299 per month
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