sugi.bio

Researching biomedical data systems and publishing the tools openly for research and discovery.

BioBTree

Unified graph database built from 70 biomedical databases — genes, proteins, diseases, drugs, ontologies, and more, with their connections. Use it directly via REST API and MCP server for AI-assisted research.

Sugi Atlas

Comprehensive, deterministic biomedical catalog — 52,000+ canonical reference pages on human genes, drugs, and diseases, built by mining the BioBTree knowledge graph. Every figure traces to primary sources. Designed for researchers and AI agents.

Enju

A content-neutral workflow coordinator where humans, autonomous AI agents, and deterministic compute tasks claim and work the same DAG as peers. Read more details in the preprint or GitHub repo.