Molecule Interaction Models
Molecule Interaction Models
49
50 Fundamentals of Atomic Force Microscopy, Part I Foundations
While the force of interaction between two point charges (Sec. 2.2) is
known by all who attend lectures in any introductory level physics class,
the interaction between a point charge (ion) and a molecule is more inter-
esting. By representing the molecule electrically as an electric dipole, the
topic becomes tractable by recalling discussions often found in intermediate
courses on electricity and magnetism. A discussion of this interaction forms
an important first step toward understanding the tip–substrate interaction
in AFM.
A review of different electrostatic interactions with increasing complex-
ity is required to better understand the important issues. An overview to
the variety of possible ion-molecule interactions is sketched in Fig. 3.1.
ion
fixed angle
Interacting polar molecule
ion
with
angle averaged
induced dipole
Fig. 3.1 An overview of ion–molecule interactions from the strongest (ion/ion) to the
weakest (ion/non-polar).
Simple Models for Molecule–Molecule Interactions 51
Fig. 3.2 A point charge Q placed a distance z away from an electric dipole p = qd. The
interaction occurs in a surrounding homogenous solvent with a dielectric constant κ.
energies when the interacting entities are sufficiently far apart. As evident
from Eq. (2.3), high values of κ for some liquids explains why they behave as
good solvents — attractive Coulombic interactions between ions of opposite
polarity are greatly reduced, thus allowing charged ions to remain dissolved
rather than agglomerating to form a solid crystal.
It should be clear that using bulk (continuum) values for κ and treating
κ as a constant under all circumstances is an approximation. The dielectric
constant can be expected to decrease from its bulk value as the number of
intervening solvent molecules decreases, a condition met when two interact-
ing molecules/atoms come into close proximity to each other. The result-
ing interaction should increase since the dielectric constant is expected
to decrease with separation, thereby enhancing the relevant electrostatic
forces. These effects are not accounted for in the discussion that follows.
A model for the interaction between a point charge and a dipole requires
the definition of a plane oriented to contain both these objects so that a
relevant angle θ can be defined as shown in Fig. 3.2. The equations derived
are coordinate specific to this definition of θ. At first glance, since the
dipole is electrically neutral, you might expect no electrostatic interaction.
However, each charge in the dipole separately experiences an interaction
force with the point charge Q. The resulting forces are nearly equal and
opposite as shown by F+ and F− in Fig. 3.2. A determination of the net
interaction force requires the vector summation of F+ and F− .
52 Fundamentals of Atomic Force Microscopy, Part I Foundations
electrostatic interaction potential energy (see Eq. (3.3)) does not contain
the electrostatic energy required to assemble the dipole located at the ori-
gin. This is a constant offset not included in Eq. (3.3) (or in any of the
discussions that follow).
The signed magnitude of the force between the point charge and dipole
(fixed θ) can always be obtained by applying Eq. (2.11)
∂ Qp 1 2Q p 1
|F (z, θ)| −
2
cos θ = cos θ. (3.5)
∂z 4πκε0 z 4πκε0 z 3
The direction of the force is given by the sign associated with F — if
|F (z, θ)| > 0, then the force is repulsive while if |F (z, θ)| < 0, the force
is attractive. Clearly depending on θ, Eq. (3.5) can be either attractive or
repulsive in nature.
Some physical
quantity, y Energy, E Multiplicity, w
y1 E1 w1
y2 E2 w2
y3 E3 w3
... ... ...
yN −1 EN −1 wN −1
yN EN wN
−E
The exponential factor e kB T is the Boltzmann weighting factor which
results when thermodynamics maximizes the configurational multiplicity
(entropy) for a system of r particles distributed among N energy lev-
els in thermal equilibrium at some temperature T . The quantity kB is
Boltzmann’s constant with the value kB = 1.38 × 10−23 J/K. The denom-
inator is known as the partition function in statistical thermodynamics
textbooks. If the variable y is continuous, then the energies Ei are likely
continuous and the sums in Eqs. (3.6) and (3.7) must be replaced by an
integral.
Estimating the weighting factors wi for each state of the system becomes
an important issue that depends on the details of the system under con-
sideration. For the specific problem of a point charge interacting with a
dipole, the proper weighting factor w comes from enumerating all possible
ways the charge Q can be oriented with respect to the dipole (see Fig. 3.3).
As shown in Fig. 3.3, Q is free to rotate in 3-dimensions, producing a strip
of width 1/2pdθ for a constant orientation angle θ.
Let w(θ) equal the number of ways that p and the point charge Q can
be arranged between angles (θ − dθ/2) and (θ + dθ/2) to give the same
interaction energy U (z, θ). We can estimate w(θ) by calculating the ratio of
the area of the shaded strip in Fig. 3.3 (which includes all possible relative
Fig. 3.3 When a point charge Q, a distance z from a dipole, is free to move with respect
to the dipole, a calculation of the factor w(θ) for the dipole-point charge interaction
U (z, θ) requires a proper weighting for each angle θ that gives the same interaction energy.
This is equivalent to integrating the position of the charge Q around the azimuthal angle
φ for each possible θ.
56 Fundamentals of Atomic Force Microscopy, Part I Foundations
This procedure for defining w(θ) can be used to define the angle averaged
value for any continuous function f (θ) by
π π
1
f (θ)|angle = f (θ)w(θ)dθ = f (θ) sin θdθ. (3.9)
0 2 0
1 [(−1) − 9 · (−1)] − (1 − 9) 2
= =
2 12 3
π π
1 1
cos2 θ|angle = cos2 θ sin θdθ = cos2 θd(cos θ)
2 0 2 0
1 3 1
1 1 x 1
= x2 dx = × =
2 −1 2 3 −1 3
π π
1 1 sin3 θ
sin θ · cos θ|angle = 2
cos θ sin θdθ = =0
2 0 2 3 0
Simple Models for Molecule–Molecule Interactions 57
To calculate the angle averaged value of U (z, θ) in Eq. (3.5), you might
be tempted to vary the angle θ defined in Fig. 3.3, following the procedure to
weight each angle as laid out above. From Eq. (3.8), you would include the
sin θ weighting factor (the factor of 1/2 can be dropped since it appears in
both the numerator and denominator) and you would obtain the following
2π π
dϕ U (z, θ) sin θdθ
U (z)|angle ≡ 0
2π
0
π ,
0
dϕ 0
sin θdθ
where
Qp cos(θ)
U (z, θ) = = Uo (z) f (θ),
4πκε0 z 2
with
Qp 1
f (θ) = cos θ and Uo (z) = (3.10)
4πκε0 z 2
π
Uo (z) cos θ sin θdθ
U (z)|angle = π
0
0
sin θdθ
− 12 cos2 θ|π0 Uo (z) [(−1)2 − (1)2 ]
= Uo (z) · = · = 0.
− cos θ|π0 2 (−1) − (1)
The result is zero because the calculation treats all angles as equally
likely. Instead, we must include a thermal average that additionally
favors those angles with lowest energy. This requires the inclusion of the
Boltzmann factor as given in Eq. (3.7) in addition to the angle weighting
factor discussed above.
Following this approach we have
−U (z,θ)
−U (z,θ) 2π
dϕ
π
U (z, θ)e kB T
sin θdθ
U (z) ≡ U (z, θ)e kB T
= 0 0
−U (z,θ)
. (3.11)
2π π
0
dϕ 0
e kB T
sin θdθ
Since U (z, θ) = Uo (z) · f (θ) as before with f (θ) = cos θ, we have
Uo (z)f (θ)
π −
Uo (z) f (θ)e kB T
sin θdθ
U (z) = 0
Uo (z)f (θ)
.
π −
0
e kB T
sin θdθ
Let
Uo (z)
β=− ,
kB T
58 Fundamentals of Atomic Force Microscopy, Part I Foundations
then π
f (θ)eβf (θ) sin θdθ
U (z) = Uo (z) π βf (θ)
0
0
e sin θdθ
π
d
= Uo (z) ln eβf (θ) sin θdθ . (3.12)
dβ 0
The last
step follows from the identity
π π
d 1 ∂
ln eβf (θ)
sin θdθ = π βf (θ) × eβf (θ)
sin θdθ
dβ 0 0
e sin θdθ ∂β 0
π
1
= π βf (θ) × f (θ)e βf (θ)
sin θdθ .
0
e sin θdθ 0
(3.13)
Equation (3.13) implies that only the natural logarithm of the integral
must be evaluated (with f (θ) = cos θ) before a derivative with respect to
β is taken. This simplifies the discussion considerably since now a Taylor
series expansion of eβf (θ) is possible. If βf (θ) 1, we can write
π
eβf (θ) sin θdθ, (3.14)
0
π π
β2 2
βf (θ)
e sin θdθ 1 + βf (θ) + f (θ) + · · · sin θdθ
0 0 2
π π
= sin θdθ + β f (θ) sin θdθ
0 0
π
β2
+ f 2 (θ) sin θdθ + · · ·
2 0
π
β2
= − cos θ|π0 + 0 + cos2 θ sin θdθ + · · ·
2 0
2
β 1 β2
= 2− + · · · . (3.15)
cos3 θ|πo + · · · = 2 +
2 3 3
This gives π
U (z,θ) d
− k T βf (θ)
U (z, θ)e B = Uo (z) ln e sin θdθ
dβ 0
d β2
= Uo (z) × ln 2 + + ···
dβ 3
1 2β
= Uo (z) × ×
2+ β2
+ ··· 3
3
Simple Models for Molecule–Molecule Interactions 59
2β 1 β2
= Uo (z) × × × 1− + ···
3 2 6
β
= Uo (z) + · · · . (3.16)
3
Since
Uo (z) Qp 1
β≡− and Uo (z) = , (3.17)
kB T 4πκε0 z 2
we finally have the angle-averaged, thermal interaction energy between a
point charge Q and a thermally rotating dipole p
1 Uo (z) 1 (Qp)2 1
U (z) = − × Uo (z) = − , (3.18)
3 kB T 3kB T (4πκε0 )2 z 4
where the leading factor of (3kB T )−1 is a combination of the angle-weighted
value of cos2 θ = 1/3 with the factor kB T coming from the Boltzmann
thermal factor which preferentially favors dipole orientations with lower
energy states.
A comparison between the fixed angle point charge–dipole electro-
static interaction potential energy and the angle averaged thermal result in
Eq. (3.18) is given in Fig. 3.4. In contrast to the fixed angle situation which
2 p= 1 D
Fixed =30o Q=+1e-
=75o
Electrostatic Energy
T=300 K
(in units of 10-21 J)
1 =2.5
angle
averaged
-1 =150o
=105o
-2
0 1 2 3 4
Ion-Dipole Separation z (nm)
Fig. 3.4 A comparison between fixed angle (see Eq. (3.3)) and a thermal angle averaged
(see Eq. (3.18)) calculation of the interaction energy U (z, θ) between a fixed dipole with
dipole moment 1D and a moveable ion of charge Q = +1.6 × 10−19 C. For the fixed
angle calculation, only a few representative angles of 30◦ , 75◦ , 105◦ and 150◦ are shown.
The interaction can be attractive (negative) or repulsive (positive), depending on the
dipole orientation. The thermal angle-averaged calculation U (z, θ) is always attractive
due to the thermal averaging introduced by the Boltzmann factor.
60 Fundamentals of Atomic Force Microscopy, Part I Foundations
enlarged
non-polar Schematic
molecule electronic
Eapp
pinduced = αE applied charge
cloud
- +
- +
molecule
diam. 2ao
Fig. 3.5 A non-polar molecule with a diameter ∼2ao in an external applied electric
field Eapp . The applied field distorts the electron distribution and the molecule becomes
polarized, acquiring a net dipole moment pinduced . The proportionality constant between
pinduced and E is the electronic polarizability α.
Simple Models for Molecule–Molecule Interactions 61
Eapp
Einternal
ao
d
d
+ +
Fig. 3.6 A simple model to estimate the electronic polarizability α. In (a), an assumed
spherically symmetric electron charge cloud with charge density ρ and radius ao sur-
rounds a positively charged nucleus. In (b), an external electric field Eapp displaces the
electronic charge cloud to the left, causing a net displacement d between the nucleus and
the electron distribution. In (c), an internal electric field Einternal develops at the nucleus
because of the displaced electronic charge. At the nucleus, Einternal opposes Eapp .
(total charge −q) with radius ao . The uniform electron charge density ρ (in
C/m3 ) is given by
−q
ρ = 4 3
. (3.20)
3 πao
In the presence of E app , the positive nucleus and the negative electronic
charge cloud will be shifted in opposite directions, producing a net charge
displacement d. The size of d will be determined by an equilibrium condi-
tion set by the internal electric field E internal that develops because of the
displaced electron cloud.
At the position of the nucleus, E internal must balance E app for a stable
condition to result. If the electron cloud maintains its spherical shape, then
the internal electric field (opposite in direction to the applied field at the
positive nucleus) can be approximated using Gauss’ law. Because of the
assumed spherical symmetry,
1 q
internal | =
|E , (3.21)
4πεo d2
where
4π 3
q = ρd .
3
Using Eq. (3.20) for ρ gives
1 qd
internal | =
|E . (3.22)
4πεo a3o
62 Fundamentals of Atomic Force Microscopy, Part I Foundations
From this structure, the H-H distance is calculated to be around 150 pm.
This suggests an estimate for the “radius” of a water molecule might
lie between a lower limit of 150 pm/2 = 75 pm and an upper limit of
∼96 pm.
The polarizability can be estimated as
Lower limit:
α = 4πεo αo = 4π × 8.85 × 10−12 C2 /Nm2 · (0.075 × 10−9 m)3
= 4.7 × 10−41 m · C2 /N.
Upper limit:
α = 4πεo αo = 4π × 8.85 × 10−12 C2 /Nm2 · (0.096 × 10−9 m)3
= 9.8 × 10−41 m · C2 /N.
These estimates for α are low, giving a value that ranges between 28%
to 59% of the book value for H2 O which is listed as 1.66×10−40 m·C2 /N.
Simple Models for Molecule–Molecule Interactions 63
Table 3.2 A table of common solvents with a listing of their dielectric properties.
Trichloro
fluoromethane CC3 F 2.0 0.45 8.5
(CFC-11,
Freon-11)
Fig. 3.7 In (a), a non-polar molecule interacts with a point charge separated by a
distance z from the molecule. In (b), the electric field produced by the point charge at
the molecule causes an induced dipole moment in the molecule that is always oriented
as drawn.
1 1
× ×
(2.3)2 (2 × 10−9 m)4
= −1.105 × 10−57 × 1.89 × 10−1 × 6.25 × 1034 J
1eV
= −1.31 × 10−23 J × = −8.2 × 10−5 eV.
1.6 × 10−19 J
This interaction energy is ∼300 times smaller than thermal energies
which are typically estimated as kB T = 4.21 × 10−21 J = 0.026 eV at
T = 300 K. In general, the ion and molecule will bind or “condense”
when their interaction energy is large compared to thermal energies.
Similarly, we might expect the ions will remain dispersed in solution
until the interaction energy becomes comparable to kB T .
1 1
× ×
(2.3)2 (2 × 10−9 m)5
= −4.42 × 10−57 × 1.89 × 10−1 × 3.13 × 1043 N
= −2.6 × 10−14 N (attractive).
This force is small, about 350 times smaller than the smallest force
(∼10 pN = 10 × 10−12 N) that can be measured using an AFM.
66 Fundamentals of Atomic Force Microscopy, Part I Foundations
Within the context of AFM, it is useful to have models that account for
the force that a tip of radius R experiences when positioned a distance d
above a flat sample as shown in Fig. 3.8. Any net force must result from
interactions between atoms that comprise the tip and sample. Usually, the
atoms in the tip and sample are electrically neutral, so ion-ion or ion-
molecule interactions are not often relevant. To understand the nature of
the tip–substrate interaction, it therefore becomes important to consider
the interaction of neutral atoms (or molecules) with other neutral atoms
(or molecules).
A number of distinct possibilities arise as shown in Fig. 3.9 and these
situations, when systematically developed, lead to the classic expressions
for the Keesom, Debye and London interactions. All three of these interac-
tions can be further grouped into a single category called a van der Waals
interaction.
Tip
Sample
d
R
Fig. 3.8 The ultimate goal is to use our understanding of molecule-molecule forces to
estimate the force between a sharp tip of radius R positioned a distance d from a flat
substrate.
Simple Models for Molecule–Molecule Interactions 67
fixed angle
polar molecule
angle averaged
polar Interacting
(Keesom)
molecule with non-polar
molecule
polarization
induced dipole
(Debye)
non-polar
non-polar Interacting molecule
induced dipole-dipole
molecule with
(London)
Fig. 3.9 An overview of molecule–molecule van der Waal interactions ranging from the
strongest (polar/polar) to the weakest (non-polar/non-polar).
U (r, ϑ1 , ϑ2 , ζ) = −
p2 · E
1,
68 Fundamentals of Atomic Force Microscopy, Part I Foundations
Fig. 3.10 The geometry required to analyze the interaction of two dipoles. The dipole
p1 is tilted by an angle ϑ1 in z–y plane. The dipole p2 is tilted by an angle ϑ2 in the
y–z plane. In addition, p2 is twisted by an angle ζ in the x–z plane. The dipole-dipole
separation distance is r.
z z
p1,y=p1sin 1 p1,z=p1cos 1
p2
p2
x x
p2cos
y y
Fig. 3.11 The interaction potential energy between two permanent dipoles will contain
two contributions that depend on the components of p1 . In general, the rotation angle
of p2 is ζ as shown.
where
E
p1 | 1
1 (r, θ) = | (2 cos θr̂ + sin θθ̂). (3.27)
4πκεo r3
Here E 1 is the electric field produced by dipole p1 .
When evaluating U (r, ϑ1 , ϑ2 , ζ) in Eq. (3.27), it is useful to first consider
the components of p1 parallel to y (p1,y ) and z (p1,z ) as limiting cases.
These two geometries are sketched in Fig. 3.11. These limiting cases
illustrate that U (r, ϑ1 = π/2, ϑ2 , ζ) cannot depend on ζ since p2 is always
perpendicular to p1 for any value of ζ. Similarly, U (r, ϑ1 = 0, ϑ2 , ζ) must
depend on the projection of p2 along the z-axis and hence must depend on
cos ζ. These two results are useful to understand the two contributions to
U (r, ϑ1 , ϑ2 , ζ) for any arbitrary value of ϑ1 .
Simple Models for Molecule–Molecule Interactions 69
Fig. 3.12 Defining the coordinates and angles for the dipole–dipole interaction between
two dipoles separated by a distance z.
The final expression for U (r, ϑ1 , ϑ2 , ζ) includes two terms that represent
the relative contributions for the two components of p1 shown in Fig. 3.11.
A derivation of the final result requires some geometrical dexterity and
uses the standard approximation for the electric field E 1 (Eq. (3.27)) from
a “pure” or “point” dipole in which r d, where d is the separation
between the charges comprising the dipole and r represents the dipole–
dipole separation.
After completing the calculation in a standard spherical-polar coordi-
nate system, it is convenient to re-label the separation distance r as z and
to redefine the angles as shown in Fig. 3.12.
The final result for the dipole–dipole interaction energy is
1 p1 p2
Utotal (z, ϑ1 , ϑ2 , ζ) = − (2 cos ϑ1 cos ϑ2 − sin ϑ1 sin ϑ2 cos ζ)
4πκεo z 3
p1 p2 1
= × f (ϑ1 , ϑ2 , ζ), (3.28)
4πκεo z 3
where
f (ϑ1 , ϑ2 , ζ) ≡ −(2 cos ϑ1 cos ϑ2 − sin ϑ1 sin ϑ2 cos ζ). (3.29)
The angular function f (ϑ1 , ϑ2 , ζ) is bounded such that
−2 ≤ f (ϑ1 , ϑ2 , ζ) ≤ 2. (3.30)
Plots of f (ϑ1 , ϑ2 , ζ) are useful to show the angular dependence of the inter-
action energy. Two special cases are provided in Fig. 3.13.
The relative orientation of two dipoles is sketched in Fig. 3.14 for a
few angles to show the configuration producing the minimum (attractive)
and maximum (repulsive) interaction. These orientations are also indicated
in Fig. 3.13 on the ζ = 0 plot. These alignments provide a quick refer-
ence (in conjunction with Eq. (3.28)) to estimate the interaction energy
70 Fundamentals of Atomic Force Microscopy, Part I Foundations
Fig. 3.13 Representative contour plots of f (ϑ1 , ϑ2 , ζ) (Eq. (3.29)) for ζ = 0 and ζ = π/2.
The labels a, b and c on the plot for ζ = 0 shows the locations for the three relative
orientations of two dipoles sketched in Fig. 3.14.
z
(a) 1=0
2=0; =0
U(z) is minimum p1 p2
(b) 1=0 z
2= ; =0
U(z) is maximum p1 p2
(c) 1= /2
z
2= /2; =
same as
1= /2 p1 p2
2=3 /2; =0
Fig. 3.14 Three representative configurations for two dipoles separated by a distance z.
between two polar molecules that have a fixed orientation with respect to
each other. Such a situation might arise if, for instance, two polar molecules
are chemically bound to a planar surface.
where now
p1 p2 1
U (z, Θ1 , Θ2 , ζ) = − [2 cos Θ1 cos Θ2 − sin Θ1 sin Θ2 cos ζ].
4πκεo z 3
(3.32)
Here again represents the thermal average over all angles and implies
that the two objects are free to move by thermal motion as they interact.
Let
where
p1 p 2 1
Uo (z) = (3.34)
4πκε0 z 3
and
To find the angle averaged value for U (z, Θ1 , Θ2 , ζ), we then must evaluate
−Uo (z)f (Ω)
2π π π
0
dζ Θ1 =0 Θ2 =0
Uo (z)f (Ω)e kB T
sin Θ1 dΘ1 sin Θ2 dΘ2
U (z) ≡ −Uo (z)f (Ω)
.
2π π π sin Θ1 dΘ1 sin Θ2 dΘ2
0
dζ Θ1 =0 Θ2 =0
e kB T
(3.36)
The discussion below follows closely that found in Sec. 3.1.2 for the case of
a point charge near a dipole. Defining
Uo (z)
β=− (3.37)
kB T
and realizing that
2π π π
d
Uo (z) × ln dζ eβf (Ω)
sin Θ1 dΘ1 sin Θ2 dΘ2
dβ 0 Θ1 =0 Θ2 =0
2π π π
Uo (z) dϕ Θ1 =0 Θ2 =0 f (Ω)eβf (Ω) sin Θ1 dΘ1 sin Θ2 dΘ2
= ζ=0
2π π π βf (Ω) sin Θ dΘ sin Θ dΘ
ζ=0
dϕ Θ1 =0 Θ2 =0
e 1 1 2 2
(3.38)
72 Fundamentals of Atomic Force Microscopy, Part I Foundations
2
1 1 (5.66 × 10−30 )2
=− Nm4
3 1.24 × 10−20 J 2.67 × 10−9
1
×
6.40 × 10−53 m6
1
= − (8.06 × 1019 J−1 ) × (1.44 × 10−100 N2 m8 )
3
×(1.56 × 1052 m−6 )
1 eV
= −6.03 × 10−29 J ×
1.6 × 10−19 J
= −3.8 × 10−10 eV
(Continued)
74 Fundamentals of Atomic Force Microscopy, Part I Foundations
z
Non-polar
molecule
E
r
E r θ
p1
-
Edipole =
+
pinduced, 2 E
Fig. 3.15 Non-polar molecules located at a radial distance r in the far-field vicinity of a
polar molecule with a permanent dipole moment p1 . Induced dipole moments pinduced,2
on the non-polar molecules align with the local direction of the electric field as shown in
the inset.
2
1 1
× 6
24 (2 × 10−9 m)
1.63 × 10−88 C2 m3
= −2 × 1.74 × 10−3 × (1.56 × 1052 m−6 )
1.11 × 10 −10 C2
Nm2
1 eV
= −7.4 × 10−29 J ×
1.6 × 10−19 J
= −4.6 × 10−10 eV.
For the parameters chosen, the interaction potential energy is compa-
rable to the Keesom interaction discussed in Example 3.4.
Simple Models for Molecule–Molecule Interactions 77
non-polar non-polar
molecule 1 molecule 2
+(t)
z
+ - + -
-
α1 (t) α2
z1, v1 z2, v2
+q -q +q
m m m m -q
fixed k z fixed k
where n and n are integer quantum numbers. The ground state energy is
just E1 + E2 with n = n = 0.
When the fluctuation involves a charge, the situation is more compli-
cated since now the two oscillators can interact and become coupled. Using
the co-ordinates defined in Fig. 3.15, the corresponding electrostatic poten-
tial energy must contain four terms and can be written as
2
1 q q2 q2 q2
Uelectr (z) = − − + . (3.53)
4πκεo z z + z2 z − z1 (z − z1 ) + z2
The dielectric constant κ of the surrounding medium (if any) is included
to match the discussions found previously in this chapter. A consequence of
this interaction term is that when z z1 and z z2 , the exact electrostatic
interaction in Eq. (3.53) can be approximately written as
1 q2
Uelectr − z2 z1 . (3.54)
2πκεo z 3
This gives a new expression for the potential energy in Schrödinger’s
Equation which is
1 2 1 2 1 q2
Utot = U1 + U2 + Uelect = kz1 + kz2 − z2 z1 . (3.55)
2 2 2πκεo z 3
The cross-term containing z2 z1 in Eq. (3.55) prevents a simple solution
for the new energy eigenvalues of the coupled oscillator problem. However,
if we rewrite the expression for Utot to have a separable form, something
like
1 1
Utot = ks (z1 + z2 )2 + ka (z1 − z2 )2 (3.56)
2 2
then progress can be made.
This can be accomplished by defining new effective spring constants ks
and ka such that
2 2
1 2 1 2 1 q2 1 (z1 + z2 ) 1 (z1 − z2 )
kz1 + kz2 − z2 z1 = ks + ka . (3.57)
2 2 2πκεo z 3 2 2 2 2
Some algebra gives
1 q2
ka = k+ , (3.58)
2πκεo z 3
1 q2
ks = k− . (3.59)
2πκεo z 3
80 Fundamentals of Atomic Force Microscopy, Part I Foundations
It follows that the new energy eigenvalues for the coupled system are
#
q2
k − 2πκε
1
o z
3
ωs = , (3.60a)
m
#
1 q2
k + 2πκε o z
3
ωa = . (3.60b)
m
The change in the quantum ground state energy will be
1 1
∆U (z) = Ucharged (z) − Uuncharged (z) = (hωa + hωs ) − 2 × hωo .
2 2
(3.61)
1 q2
Assuming that the electrostatic force 4πκε 2 is small compared to the
1 o z
E E
+q -q
m m m
fixed fixed k
z2
(a) (b)
Fig. 3.17 A simple model to estimate the parameters q and k in the London dispersion
force. The electric field E is produced by molecule 1 (not shown). The force of the
spring in molecule 2 matches the electrostatic force produced by the electric field from
molecule 1.
Table 3.3 Dipole moments p, polarizabilities α, ionization energies I, and estimates for the various contributions to the van der
Waals interaction for representative gas phase atoms and molecules. A comparison to experiment is also made where CExper is
αo Percent
p(D) (in 10−30 m3 ) I(eV) CKeesom CDebye CLondon CvdW CExper Diff.
83
84 Fundamentals of Atomic Force Microscopy, Part I Foundations
= 36.4 × 10−79 J m6 ,
2
1 p21 α2 CDebye
UDebye = − ·2 6
=− ,
4πκε0 z z6
2
1
CDebye = · 2p2 α
4πκε0
2
1
= 2(1.46D · 3.33 × 10−30 Cm/D)2
4π · 8.85 × 10−12 Nm
C2
2
(Continued)
86 Fundamentals of Atomic Force Microscopy, Part I Foundations
C2
×(4π · 8.85 × 10−12 · 2.3 × 10−30 m3 )
Nm2
2 4
19 N m
= 8.08 × 10 (2)(23.6 × 10−60 C2 m2 )
C4
m
× 2.56 × 10−40 C 2
N
= 9.8 × 10−79 J m6 ,
2
1 3 I1 I2 α1 α2 CLondon
ULondon =− · 6
=− ,
4πκε0 2 I1 + I2 z z6
2
1 3 I
CLondon = · α2
4πκε0 2 2
2
1 3 1.602 × 10−19 J
= 10.2 eV ·
4π · 8.85 × 10−12 Nm
C2
2
4 eV
2
C2 −12 −30 3
× 4π · 8.85 × 10 · 2.3 × 10 m
Nm2
N2 m 4 3 −18 −80 4 m
2
= 8.08 × 1019 (1.63 × 10 J) 6.55 × 10 C
C4 4 N2
= 64.7 × 10−79 J m6 ,
= 110.9 × 10−79 J m6 .
b) The force between the two molecules is attractive and can be found
by taking the negative gradient of UvdW (z) with respect to
(Continued)
Simple Models for Molecule–Molecule Interactions 87
origins for these dipole moments. Molecules containing atoms with differ-
ent electronegativities create permanent molecular dipole moments as the
atoms comprising the molecule produce small shifts in the electronic charge
distribution. Secondly, molecules and atoms with no net dipole moment can
develop an induced dipole moment when subjected to an external electric
field. Lastly, neutral atoms and molecules with no net dipole moment can
develop a fluctuating, time-dependent dipole moment that depends on the
size and shape of the atom or molecule under consideration. This effect is
strictly quantum mechanical in nature. The time-correlated fluctuations of
these spontaneous dipole moments conspire to produce an attractive inter-
action between all atoms and molecules.
The derivation of the interaction potential energy between gas-phase
molecules was discussed in some detail. The classical results obtained by
Keesom and Debye were derived for both static dipoles and for dipoles
induced by external electric fields. London’s discussion of the spontaneous
dipole moment in an electrically neutral object modeled as a quantum
spring-mass system is also derived. While London’s derivation leads to a
short-range interaction that is always attractive, the interaction between
permanent dipoles can be either attractive or repulsive depending on the rel-
ative dipole orientation. A thermal averaging procedure is discussed which
shows how molecules with a permanent dipole moment, free to rotate, can
take advantage of thermal motion to orient in such a way as to always pro-
duce a net attractive interaction. Taken together, the sum of these three
possibilities — permanent dipole, induced dipole and fluctuating dipole —
lead to short-range attractive interactions that all vary as 1/z 6 .
Further reading:
[atkins10] P.W. Atkins and J. de Paula, Physical Chemistry, 9th edition, W.H.
Freeman and Co., New York NY, USA (2010).
[jeffrey 97] G.A. Jeffrey, An introduction to hydrogen bonding. Oxford University
Press (1997).
[kotz06] J.C. Kotz, P. Treichel and G.C. Weaver, Chemistry and chemical reac-
tivity, 6th edition, Thomson Brooks/Cole, Belmont CA, USA (2006).
[rigby86] M. Rigby, E.B. Smith, W.A. Wakeham, and G.C. Maitland, The
forces Between Molecules, Oxford-Clarendon Press (1986).
[stone96] A.J. Stone, Theory of Intermolecular Forces, Oxford-Clarendon Press
(1996).
[nelson67 ] R.D. Nelson, D.R. Lide, A.A. Maryott, “Selected Values of Elec-
tric Dipole Moments for Molecules in the Gas Phase”, Nat. Stand.
Ref. Data Set., Natl. Bur. Stand. (NSRDS-NBS) No. 10 (1967).
3.6 Problems
Configuration Θ1 Θ2 ζ
(a)
(b)
(c)
(d)
Calculate the interaction potential energy (in eV) for each of the config-
urations shown above. Which of the four configurations is most stable?
Which of the four configurations produces the largest force between the
two dipoles?
2. Calculate the interaction potential energy between two fixed water
molecules in vacuum whose centers are 10 nm apart, and whose dipole
axes make an angle of 120◦ with respect to each other. Assume the water
molecules lie in the same plane and they are located in free space. How
does the interaction potential energy change if the two molecules can
orient themselves by thermal motion? Assume T = 300 K.
3. A water molecule (dipole moment 1.85 D) approaches a singly charged
ion. Describe the most energetically favorable orientation of the water
molecule with respect to the ion. Calculate the potential energy of
the interaction at a distance of 1.0 nm and compare this to the ther-
mal energy (3kB T /2) at 20◦ C based on the equipartition theorem.
Assume the dielectric constant of liquid water is 80. At this tempera-
ture, will the water molecule “lock-in” to a fixed position with respect to
the ion?
4. The discussion in this chapter often uses distances between molecules
that are typically less than 1 nm. Is this realistic? On average, what
is the distance between molecules in 1 mole of gas at P = 100 kPa
pressure and T = 300 K? Assume the ideal gas law P V = N kB T is
valid. What is the value of V (in m3 ) when the number of particles N is
equal to NA = 6.02 × 1023 ? Divide V by NA to obtain an estimate for
the volume per gas atom. Take the cube root of this value to estimate
the distance between atoms (or molecules) in the gas.
5. An ion with a charge q is situated a distance z from a non-polar molecule
with a polarizability volume α. Both the ion and molecule are in a
dielectric medium with a relative dielectric constant κ. (a) What is the
induced dipole moment? (b) What is the electric field generated by this
induced dipole at the location of the point charge? (c) What is the force
of attraction between the charge q and the molecule?
Simple Models for Molecule–Molecule Interactions 91
ion-dipole
hydrogen bonding
ion-ion
ion-induced dipolar
dipole-dipole
dipole-induced dipolar
induced dipole-induced dipole
where the angles are defined in the figure. Show this is equivalent to
the expression given by Eq. 3.28.
9. Calculate the potential energy of interaction between two Ar atoms
separated by 0.5 nm in vacuum. The polarizability volume of Ar is
about 1.6 × 10−30 m3 , the ionization energy of Ar is about 15.7 eV per
atom.
92 Fundamentals of Atomic Force Microscopy, Part I Foundations
helium He 4.2 K 31 pm
neon Ne 27.3 K 38 pm
argon Ar 87.4 K 71 pm
krypton Kr 121.5 K 88 pm
xenon Xe 166.6 K 108 pm
radon Rn 211.5 K 120 pm