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16. WABI 2016: Aarhus, Denmark
- Martin C. Frith
, Christian Nørgaard Storm Pedersen:
Algorithms in Bioinformatics - 16th International Workshop, WABI 2016, Aarhus, Denmark, August 22-24, 2016. Proceedings. Lecture Notes in Computer Science 9838, Springer 2016, ISBN 978-3-319-43680-7 - Yannis Almirantis, Panagiotis Charalampopoulos
Optimal Computation of Avoided Words. 1-13 - Arnon Benshahar, Vered Chalifa-Caspi, Danny Hermelin
A Biclique Approach to Reference Anchored Gene Blocks and Its Applications to Pathogenicity Islands. 14-26 - Anna Bomersbach, Marco Chiarandini, Fabio Vandin:
An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer. 27-39 - Brona Brejová, Askar Gafurov, Dana Pardubská, Michal Sabo, Tomás Vinar
Isometric Gene Tree Reconciliation Revisited. 40-51 - Brian Brubach:
Further Improvement in Approximating the Maximum Duo-Preservation String Mapping Problem. 52-64 - Matthieu David, Guillaume Fertin
SpecTrees: An Efficient Without a Priori Data Structure for MS/MS Spectra Identification. 65-76 - Dan F. DeBlasio, John D. Kececioglu:
Predicting Core Columns of Protein Multiple Sequence Alignments for Improved Parameter Advising. 77-89 - Yun Deng, David Fernández-Baca:
Fast Compatibility Testing for Phylogenies with Nested Taxa. 90-101 - Daniel Doerr, Pedro Feijão, Metin Balaban, Cédric Chauve:
The Gene Family-Free Median of Three. 102-120 - Riccardo Dondi, Nadia El-Mabrouk, Manuel Lafond:
Correction of Weighted Orthology and Paralogy Relations - Complexity and Algorithmic Results. 121-136 - Mohammed El-Kebir
Copy-Number Evolution Problems: Complexity and Algorithms. 137-149 - Marius Erbert, Steffen Rechner, Matthias Müller-Hannemann
Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support. 150-161 - Guillaume Fertin
Genome Rearrangements on Both Gene Order and Intergenic Regions. 162-173 - Jay Ghurye, Mihai Pop
Better Identification of Repeats in Metagenomic Scaffolding. 174-184 - Ludovic Gillet, Simon Rösch, Thomas Tschager, Peter Widmayer:
A Better Scoring Model for De Novo Peptide Sequencing: The Symmetric Difference Between Explained and Measured Masses. 185-196 - Sven Jager, Benjamin Schiller, Thorsten Strufe, Kay Hamacher:
StreAM- T_g : Algorithms for Analyzing Coarse Grained RNA Dynamics Based on Markov Models of Connectivity-Graphs. 197-209 - Alexander A. Loboda, Maxim N. Artyomov, Alexey A. Sergushichev
Solving Generalized Maximum-Weight Connected Subgraph Problem for Network Enrichment Analysis. 210-221 - Sorina Maciuca, Carlos del Ojo Elias
A Natural Encoding of Genetic Variation in a Burrows-Wheeler Transform to Enable Mapping and Genome Inference. 222-233 - Svend V. Nielsen, Simon Simonsen, Asger Hobolth:
Inferring Population Genetic Parameters: Particle Filtering, HMM, Ripley's K-Function or Runs of Homozygosity? 234-245 - Adam M. Novak
A Graph Extension of the Positional Burrows-Wheeler Transform and Its Applications. 246-256 - Yaron Orenstein
Compact Universal k-mer Hitting Sets. 257-268 - Lianrong Pu, Daming Zhu, Haitao Jiang:
A New Approximation Algorithm for Unsigned Translocation Sorting. 269-280 - Emilie Renard, Samuel Branders, Pierre-Antoine Absil:
Independent Component Analysis to Remove Batch Effects from Merged Microarray Datasets. 281-292 - Diego P. Rubert
A Linear Time Approximation Algorithm for the DCJ Distance for Genomes with Bounded Number of Duplicates. 293-306 - Christopher Schröder, Sven Rahmann:
A Hybrid Parameter Estimation Algorithm for Beta Mixtures and Applications to Methylation State Classification. 307-319
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