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Kiri Choi
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2020 – today
- 2023
- [j12]Ciaran M. Welsh, Jin Xu
, Lucian P. Smith
libRoadRunner 2.0: a high performance SBML simulation and analysis library. Bioinform. 39(1) (2023) - [j11]Kiri Choi
Polymer Physics-Based Classification of Neurons. Neuroinformatics 21(1): 177-193 (2023) - 2022
- [j10]Bilal Shaikh
BioSimulators: a central registry of simulation engines and services for recommending specific tools. Nucleic Acids Res. 50(W1): 108-114 (2022) - [j9]Soon Ho Kim, Junhyuk Woo, Kiri Choi
Neural Information Processing and Computations of Two-Input Synapses. Neural Comput. 34(10): 2102-2131 (2022) - [i2]Ciaran M. Welsh, Jin Xu, Lucian P. Smith, Matthias König, Kiri Choi, Herbert M. Sauro:
libRoadRunner 2.0: A High-Performance SBML Simulation and Analysis Library. CoRR abs/2203.01175 (2022) - [i1]Bilal Shaikh, Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S. Andrews, Azraf Anwar, Moritz E. Beber, Frank T. Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G. Bard Ermentrout, James R. Faeder, Andrew P. Freiburger, Fabian Fröhlich
BioSimulators: a central registry of simulation engines and services for recommending specific tools. CoRR abs/2203.06732 (2022)
2010 – 2019
- 2019
- [j8]Curtis Madsen, Ángel Goñi-Moreno, Umesh P
Synthetic Biology Open Language (SBOL) Version 2.3. J. Integr. Bioinform. 16(2) (2019) - 2018
- [j7]Yosef Bedaso, Frank T. Bergmann, Kiri Choi
A portable structural analysis library for reaction networks. Biosyst. 169-170: 20-25 (2018) - [j6]Kiri Choi
Tellurium: An extensible python-based modeling environment for systems and synthetic biology. Biosyst. 171: 74-79 (2018) - [j5]Robert Sidney Cox III, Curtis Madsen, James Alastair McLaughlin
Synthetic Biology Open Language (SBOL) Version 2.2.0. J. Integr. Bioinform. 15(1) (2018) - [j4]J. Kyle Medley
Tellurium notebooks - An environment for reproducible dynamical modeling in systems biology. PLoS Comput. Biol. 14(6) (2018) - 2016
- [j3]Kiri Choi
phraSED-ML: A paraphrased, human-readable adaptation of SED-ML. J. Bioinform. Comput. Biol. 14(6): 1650035:1-1650035:11 (2016) - [j2]Jacob Beal, Robert Sidney Cox III, Raik Grünberg
Synthetic Biology Open Language (SBOL) Version 2.1.0. J. Integr. Bioinform. 13(3) (2016) - 2015
- [j1]Kyung Hyuk Kim
Controlling E. coli Gene Expression Noise. IEEE Trans. Biomed. Circuits Syst. 9(4): 497-504 (2015)
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