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Olivier Commowick
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2020 – today
- 2022
- [j17]Antoine Legouhy, François Rousseau, Christian Barillot, Olivier Commowick:
An Iterative Centroid Approach for Diffeomorphic Online Atlasing. IEEE Trans. Medical Imaging 41(9): 2521-2531 (2022) - [c42]Thomas Durantel, Julie Coloigner, Olivier Commowick:
A Convolutional Wasserstein Distance for Tractography Evaluation: Complementarity Study to State-of-the-Art Measures. ISBI 2022: 1-5 - [c41]Haykel Snoussi, Benoît Combès, Olivier Commowick, Elise Bannier, Anne Kerbrat, Julien Cohen-Adad, Christian Barillot, Emmanuel Caruyer:
Reproducibility and Evolution of Diffusion Mri Measurements Within the Cervical Spinal Cord in Multiple Sclerosis. ISBI 2022: 1-5 - [i1]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, J. Alison Noble, Carlos Ortiz-de-Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A. Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne L. Martel, et al.:
Biomedical image analysis competitions: The state of current participation practice. CoRR abs/2212.08568 (2022) - 2021
- [j16]Olivier Commowick, Michaël Kain, Romain Casey, Roxana Ameli, Jean-Christophe Ferré, Anne Kerbrat, Thomas Tourdias, Frédéric Cervenansky, Sorina Camarasu-Pop, Tristan Glatard, Sandra Vukusic, Gilles Edan, Christian Barillot, Michel Dojat, François Cotton:
Multiple sclerosis lesions segmentation from multiple experts: The MICCAI 2016 challenge dataset. NeuroImage 244: 118589 (2021) - [j15]Renaud Hédouin, Christian Barillot, Olivier Commowick:
Interpolation and Averaging of Diffusion MRI Multi-Compartment Models. IEEE Trans. Medical Imaging 40(3): 916-927 (2021) - 2020
- [j14]Antoine Ackaouy, Nicolas Courty, Emmanuel Vallée, Olivier Commowick, Christian Barillot, Francesca Galassi:
Unsupervised Domain Adaptation With Optimal Transport in Multi-Site Segmentation of Multiple Sclerosis Lesions From MRI Data. Frontiers Comput. Neurosci. 14: 19 (2020)
2010 – 2019
- 2019
- [c40]Antoine Legouhy, Olivier Commowick, François Rousseau, Christian Barillot:
Unbiased Longitudinal Brain Atlas Creation Using Robust Linear Registration And Log-Euclidean Framework For Diffeomorphisms. ISBI 2019: 1038-1041 - [c39]Haykel Snoussi, Emmanuel Caruyer, Julien Cohen-Adad, Olivier Commowick, Benoît Combès, Elise Bannier, Anne Kerbrat, Christian Barillot:
Geometric Evaluation of Distortion Correction Methods in Diffusion MRI of the Spinal Cord. ISBI 2019: 1696-1699 - [c38]Antoine Legouhy, Olivier Commowick, François Rousseau, Christian Barillot:
Online Atlasing Using an Iterative Centroid. MICCAI (3) 2019: 366-374 - 2018
- [c37]Sudhanya Chatterjee, Olivier Commowick, Onur Afacan, Simon K. Warfield, Christian Barillot:
Multi-compartment model of brain tissues from T2 relaxometry MRI using gamma distribution. ISBI 2018: 141-144 - [c36]Sudhanya Chatterjee, Olivier Commowick, Onur Afacan, Simon K. Warfield, Christian Barillot:
Identification of Gadolinium Contrast Enhanced Regions in MS Lesions Using Brain Tissue Microstructure Information Obtained from Diffusion and T2 Relaxometry MRI. MICCAI (3) 2018: 63-71 - [c35]Aymeric Stamm, Olivier Commowick, Alessandra Menafoglio, Simon K. Warfield:
A Bayes Hilbert Space for Compartment Model Computing in Diffusion MRI. MICCAI (3) 2018: 72-80 - [c34]Francesca Galassi, Olivier Commowick, Emmanuel Vallée, Christian Barillot:
Voxel-Wise Comparison with a-contrario Analysis for Automated Segmentation of Multiple Sclerosis Lesions from Multimodal MRI. BrainLes@MICCAI (1) 2018: 180-188 - 2017
- [j13]Aaron Carass, Snehashis Roy, Amod Jog, Jennifer L. Cuzzocreo, Elizabeth M. Sweeney, Adrian Gherman, Julia Button, James Nguyen, Ferran Prados, Carole H. Sudre, Manuel Jorge Cardoso, Niamh Cawley, Olga Ciccarelli, Claudia A. M. Wheeler-Kingshott, Sébastien Ourselin, Laurence Catanese, Hrishikesh Deshpande, Pierre Maurel, Olivier Commowick, Christian Barillot, Xavier Tomas-Fernandez:
Longitudinal multiple sclerosis lesion segmentation: Resource and challenge. NeuroImage 148: 77-102 (2017) - [j12]Renaud Hédouin, Olivier Commowick, Elise Bannier, Benoit Scherrer, Maxime Taquet, Simon K. Warfield, Christian Barillot:
Block-Matching Distortion Correction of Echo-Planar Images With Opposite Phase Encoding Directions. IEEE Trans. Medical Imaging 36(5): 1106-1115 (2017) - [c33]Olivier Commowick, Renaud Hédouin, Emmanuel Caruyer, Christian Barillot:
\ell _2 Similarity Metrics for Diffusion Multi-Compartment Model Images Registration. MICCAI (1) 2017: 257-265 - 2016
- [j11]Christian Barillot, Elise Bannier, Olivier Commowick, Isabelle Corouge, Anthony Baire, Ines Fakhfakh, Justine Guillaumont, Yao Yao, Michaël Kain:
Shanoir: Applying the Software as a Service Distribution Model to Manage Brain Imaging Research Repositories. Frontiers ICT 3: 25 (2016) - [j10]Christian Barillot, Gilles Edan, Olivier Commowick:
Imaging biomarkers in multiple Sclerosis: From image analysis to population imaging. Medical Image Anal. 33: 134-139 (2016) - [c32]Benoît Combès, Anne Kerbrat, Olivier Commowick, Christian Barillot:
A Bayesian Model to Assess T_2 Values and Their Changes Over Time in Quantitative MRI. MICCAI (3) 2016: 570-578 - [c31]Aymeric Stamm, Olivier Commowick, Simon K. Warfield, Simone Vantini:
Comprehensive Maximum Likelihood Estimation of Diffusion Compartment Models Towards Reliable Mapping of Brain Microstructure. MICCAI (3) 2016: 622-630 - 2015
- [j9]Olivier Commowick, Adil Maarouf, Jean-Christophe Ferré, Jean-Philippe Ranjeva, Gilles Edan, Christian Barillot:
Diffusion MRI abnormalities detection with orientation distribution functions: A multiple sclerosis longitudinal study. Medical Image Anal. 22(1): 114-123 (2015) - [c30]Yogesh Karpate, Olivier Commowick, Christian Barillot:
Probabilistic one class learning for automatic detection of multiple sclerosis lesions. ISBI 2015: 486-489 - [c29]Renaud Hédouin, Olivier Commowick, Maxime Taquet, Elise Bannier, Benoit Scherrer, Simon K. Warfield, Christian Barillot:
Symmetric block-matching registration for the distortion correction of Echo-Planar images. ISBI 2015: 717-720 - [c28]Renaud Hédouin, Olivier Commowick, Aymeric Stamm, Christian Barillot:
Interpolation and Averaging of Multi-Compartment Model Images. MICCAI (2) 2015: 354-362 - [c27]Yogesh Karpate, Olivier Commowick, Christian Barillot:
Robust detection of multiple sclerosis lesions from intensity-normalized multi-channel MRI. Medical Imaging: Image Processing 2015: 941314 - 2014
- [j8]Maxime Taquet, Benoit Scherrer, Olivier Commowick, Jurriaan M. Peters, Mustafa Sahin, Benoît Macq, Simon K. Warfield:
A Mathematical Framework for the Registration and Analysis of Multi-Fascicle Models for Population Studies of the Brain Microstructure. IEEE Trans. Medical Imaging 33(2): 504-517 (2014) - [c26]Fang Cao, Olivier Commowick, Camille Maumet, Christian Barillot:
Quantitative relaxation templates for the human brain at 3T. ISBI 2014: 57-60 - [c25]Aymeric Stamm, Olivier Commowick, Patrick Pérez, Christian Barillot:
Fast identification of optimal fascicle configurations from standard clinical diffusion MRI using Akaike information criterion. ISBI 2014: 238-241 - [c24]Yogesh Karpate, Olivier Commowick, Christian Barillot, Gilles Edan:
Longitudinal Intensity Normalization in Multiple Sclerosis Patients. CLIP@MICCAI 2014: 118-125 - 2013
- [c23]Aymeric Stamm, Olivier Commowick, Christian Barillot, Patrick Pérez:
Adaptive Multi-modal Particle Filtering for Probabilistic White Matter Tractography. IPMI 2013: 594-606 - [c22]Alessandro Crimi, Olivier Commowick, Jean-Christophe Ferré, Adil Maarouf, Gilles Edan, Christian Barillot:
Semi-automatic classification of lesion patterns in patients with clinically isolated syndrome. ISBI 2013: 1102-1105 - [c21]Sylvain Prima, Olivier Commowick:
Using bilateral symmetry to improve non-local means denoising of MR brain images. ISBI 2013: 1231-1234 - [c20]Emmanuel Vallée, Olivier Commowick, Camille Maumet, Aymeric Stamm, Elisabeth Le Rumeur, Catherine Allaire, Jean-Christophe Ferré, Clément de Guibert, Christian Barillot:
Statistical Analysis of White Matter Integrity for the Clinical Study of Typical Specific Language Impairment in Children. CDMRI/MMBC@MICCAI 2013: 187-195 - [c19]Alessandro Crimi, Olivier Commowick, Jean-Christophe Ferré, Adil Maarouf, Gilles Edan, Christian Barillot:
Multiple sclerosis lesions evolution in patients with clinically isolated syndrome. Medical Imaging: Image Processing 2013: 86690I - [c18]Sylvain Prima, Olivier Commowick:
Multimodal rigid-body registration of 3D brain images using bilateral symmetry. Medical Imaging: Image Processing 2013: 866911 - 2012
- [j7]Ralph O. Suarez, Olivier Commowick, Sanjay P. Prabhu, Simon K. Warfield:
Automated delineation of white matter fiber tracts with a multiple region-of-interest approach. NeuroImage 59(4): 3690-3700 (2012) - [j6]Olivier Commowick, Alireza Akhondi Asl, Simon K. Warfield:
Estimating A Reference Standard Segmentation With Spatially Varying Performance Parameters: Local MAP STAPLE. IEEE Trans. Medical Imaging 31(8): 1593-1606 (2012) - [c17]Olivier Commowick, Nicolas Wiest-Daesslé, Sylvain Prima:
Block-matching strategies for rigid registration of multimodal medical images. ISBI 2012: 700-703 - [c16]Olivier Commowick, Nicolas Wiest-Daesslé, Sylvain Prima:
Automated Diffeomorphic Registration of Anatomical Structures with Rigid Parts: Application to Dynamic Cervical MRI. MICCAI (2) 2012: 163-170 - [c15]Fang Cao, Olivier Commowick, Elise Bannier, Jean-Christophe Ferré, Gilles Edan, Christian Barillot:
MRI Estimation of T 1 Relaxation Time Using a Constrained Optimization Algorithm. MBIA 2012: 203-214 - [c14]Maxime Taquet, Benoit Scherrer, Olivier Commowick, Jurriaan M. Peters, Mustafa Sahin, Benoît Macq, Simon K. Warfield:
Registration and Analysis of White Matter Group Differences with a Multi-fiber Model. MICCAI (3) 2012: 313-320 - [c13]Olivier Commowick, Aymeric Stamm:
Non-local Robust Detection of DTI White Matter Differences with Small Databases. MICCAI (3) 2012: 476-484 - 2011
- [j5]Keelin Murphy, Bram van Ginneken, Joseph M. Reinhardt, Sven Kabus, Kai Ding, Xiang Deng, Kunlin Cao, Kaifang Du, Gary E. Christensen, Vincent Garcia, Tom Vercauteren, Nicholas Ayache, Olivier Commowick, Grégoire Malandain, Ben Glocker, Nikos Paragios, Nassir Navab, Vladlena Gorbunova, Jon Sporring, Marleen de Bruijne, Xiao Han, Mattias P. Heinrich, Julia A. Schnabel, Mark Jenkinson, Cristian Lorenz, Marc Modat, Jamie McClelland, Sébastien Ourselin, Sascha E. A. Muenzing, Max A. Viergever, Dante De Nigris, D. Louis Collins, Tal Arbel, Marta Peroni, Rui Li, Gregory C. Sharp, Alexander Schmidt-Richberg, Jan Ehrhardt, René Werner, Dirk Smeets, Dirk Loeckx, Gang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee, Marius Staring, Stefan Klein, Berend C. Stoel, Martin Urschler, Manuel Werlberger, Jef Vandemeulebroucke, Simon Rit, David Sarrut, Josien P. W. Pluim:
Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. IEEE Trans. Medical Imaging 30(11): 1901-1920 (2011) - [c12]Ralph O. Suarez, Olivier Commowick, Xavier Tomas-Fernandez, Sanjay P. Prabhu, Simon K. Warfield:
Automated detection of white matter fiber bundles. ISBI 2011: 845-848 - 2010
- [j4]Olivier Commowick, Simon K. Warfield:
Estimation of Inferential Uncertainty in Assessing Expert Segmentation Performance From STAPLE. IEEE Trans. Medical Imaging 29(3): 771-780 (2010) - [c11]Olivier Commowick, Simon K. Warfield:
Incorporating Priors on Expert Performance Parameters for Segmentation Validation and Label Fusion: A Maximum a Posteriori STAPLE. MICCAI (3) 2010: 25-32 - [c10]Liliane Ramus, Olivier Commowick, Grégoire Malandain:
Construction of Patient Specific Atlases from Locally Most Similar Anatomical Pieces. MICCAI (3) 2010: 155-162
2000 – 2009
- 2009
- [j3]Vincent Arsigny, Olivier Commowick, Nicholas Ayache, Xavier Pennec:
A Fast and Log-Euclidean Polyaffine Framework for Locally Linear Registration. J. Math. Imaging Vis. 33(2): 222-238 (2009) - [j2]Olivier Commowick, Simon K. Warfield:
A Continuous STAPLE for Scalar, Vector, and Tensor Images: An Application to DTI Analysis. IEEE Trans. Medical Imaging 28(6): 838-846 (2009) - [c9]Olivier Commowick, Simon K. Warfield:
Estimation of Inferential Uncertainty in Assessing Expert Segmentation Performance from Staple. IPMI 2009: 701-712 - [c8]Olivier Commowick, Simon K. Warfield, Grégoire Malandain:
Using Frankenstein's Creature Paradigm to Build a Patient Specific Atlas. MICCAI (1) 2009: 993-1000 - 2008
- [j1]Olivier Commowick, Vincent Arsigny, A. Isambert, J. Costa, F. Dhermain, F. Bidault, Pierre-Yves Bondiau, Nicholas Ayache, Grégoire Malandain:
An efficient locally affine framework for the smooth registration of anatomical structures. Medical Image Anal. 12(4): 427-441 (2008) - [c7]Olivier Commowick, Pierre Fillard, Olivier Clatz, Simon K. Warfield:
Detection of DTI White Matter Abnormalities in Multiple Sclerosis Patients. MICCAI (1) 2008: 975-982 - 2007
- [b1]Olivier Commowick:
Création et utilisation d'atlas anatomiques numériques pour la radiothérapie. (Design and Use of Anatomical Atlases for Radiotherapy). University of Nice Sophia Antipolis, France, 2007 - [c6]Olivier Commowick, Grégoire Malandain:
Efficient Selection of the Most Similar Image in a Database for Critical Structures Segmentation. MICCAI (2) 2007: 203-210 - 2006
- [c5]Olivier Commowick, Vincent Arsigny, María Jimena Costa, Nicholas Ayache, Grégoire Malandain:
An efficient locally affine framework for the registration of anatomical structures. ISBI 2006: 478-481 - [c4]Vincent Arsigny, Olivier Commowick, Xavier Pennec, Nicholas Ayache:
A Log-Euclidean Framework for Statistics on Diffeomorphisms. MICCAI (1) 2006: 924-931 - [c3]Vincent Arsigny, Olivier Commowick, Xavier Pennec, Nicholas Ayache:
A Log-Euclidean Polyaffine Framework for Locally Rigid or Affine Registration. WBIR 2006: 120-127 - 2005
- [c2]Olivier Commowick, Radu Stefanescu, Pierre Fillard, Vincent Arsigny, Nicholas Ayache, Xavier Pennec, Grégoire Malandain:
Incorporating Statistical Measures of Anatomical Variability in Atlas-to-Subject Registration for Conformal Brain Radiotherapy. MICCAI (2) 2005: 927-934 - 2004
- [c1]Radu Stefanescu, Olivier Commowick, Grégoire Malandain, Pierre-Yves Bondiau, Nicholas Ayache, Xavier Pennec:
Non-rigid Atlas to Subject Registration with Pathologies for Conformal Brain Radiotherapy. MICCAI (1) 2004: 704-711
Coauthor Index
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