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Amber not finding sites in bam

bugSomething isn't workingSomething isn't working

Status: Open.

#250 In nf-core/oncoanalyser;

· kvaldez opened on Sep 11, 2025

Support for multiple tumor samples per patient (longitudinal and multi-region) in a single run

enhancementNew feature or requestNew feature or request

Status: Open.

#249 In nf-core/oncoanalyser;

· peteryzheng opened on Sep 11, 2025

Update the VIRUSBreakend database

Status: Open.

#248 In nf-core/oncoanalyser;

· scwatts opened on Sep 4, 2025

· 

Release 2.2.1

Known issues

Status: Open.

#177 In nf-core/oncoanalyser;

· scwatts opened on Apr 5, 2025

Support ARM64/AArch64 architecture

enhancementNew feature or requestNew feature or request

Status: Open.

#139 In nf-core/oncoanalyser;

· scwatts opened on Mar 3, 2025

Add <code>vCHORD</code> to oncoanalyser for HRD detection in targeted mode

enhancementNew feature or requestNew feature or request

Status: Open.

#118 In nf-core/oncoanalyser;

· bounlu opened on Dec 6, 2024

Make <code>circos</code> plots optional in the <code>orange</code> report

enhancementNew feature or requestNew feature or request

Status: Open.

#113 In nf-core/oncoanalyser;

· bounlu opened on Nov 29, 2024

Add documentation describing workflow design choices

enhancementNew feature or requestNew feature or request

Status: Open.

#84 In nf-core/oncoanalyser;

· scwatts opened on Aug 7, 2024

Implement basic sequence and alignment QC reporting

enhancementNew feature or requestNew feature or request

Status: Open.

#83 In nf-core/oncoanalyser;

· scwatts opened on Aug 7, 2024

Reintroduce MultiQC for workflow and analysis summary

enhancementNew feature or requestNew feature or request

Status: Open.

#81 In nf-core/oncoanalyser;

· scwatts opened on Aug 7, 2024

· 

Release 3.0.0

UMI support in WGTS mode

enhancementNew feature or requestNew feature or request

Status: Open.

#73 In nf-core/oncoanalyser;

· SPPearce opened on Jul 31, 2024