Repositories list

• Biochef

  Public
  BioChef a tool for fast browser tests in genome and proteome.

  JavaScript

  •

  MIT License

  •0•0•2•0•Updated Oct 7, 2025Oct 7, 2025

• fed_rf

  Public
  Python

  •

  MIT License

  •3•3•0•0•Updated Sep 29, 2025Sep 29, 2025

• pruning

  Public
  A Gradient-Based Approach to Adaptive Neural Network Pruning

  Python

  •0•0•0•0•Updated Sep 3, 2025Sep 3, 2025

• Controlled-Health-Answer-Generation

  Public
  Repository for paper "A Framework for Fine-Grained Complexity Control in Health Answer Generation", Ferreira et al., ACL 2025

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 31, 2025Jul 31, 2025

• CoPipes

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Jul 23, 2025Jul 23, 2025

• SMM4H2025

  Public
  Python

  •0•0•0•0•Updated Jun 17, 2025Jun 17, 2025

• VCFX

  Public
  VCFX is a collection of specialized C/C++ command-line tools designed for efficient manipulation, analysis, and transformation of VCF files.

  genomicscpptoolkit+ 1vcf

  C++

  •

  MIT License

  •1•2•0•0•Updated Jun 1, 2025Jun 1, 2025

• HYMET

  Public
  HYMET: A Hybrid Metagenomic Pipeline for Accurate and Efficient Taxonomic Classification

  Python

  •

  MIT License

  •2•0•0•0•Updated May 9, 2025May 9, 2025

• sarif-orchestrator

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 29, 2025Mar 29, 2025

• HPC-guides

  Public
  0•2•0•0•Updated Feb 21, 2025Feb 21, 2025

• Multi-Head-CRF

  Public
  Python

  •

  MIT License

  •0•2•2•1•Updated Nov 29, 2024Nov 29, 2024

• BioNExt

  Public
  A Biomedical Novelty Relation Extractor System

  Python

  •

  MIT License

  •1•7•1•0•Updated Jul 22, 2024Jul 22, 2024

• HK-FG

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jun 23, 2024Jun 23, 2024

• Market-Profiles

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jun 18, 2024Jun 18, 2024

• nlp-trends

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated May 23, 2024May 23, 2024

• SPARe

  Public
  python package for performing sparse-retrieval on accelerated hardware

  Python

  •

  Apache License 2.0

  •0•3•0•0•Updated Mar 28, 2024Mar 28, 2024

• BC8-SympTEMIST

  Public
  BioCreative VIII track 2

  biomedical-nlp

  Python

  •

  MIT License

  •0•1•0•0•Updated Mar 4, 2024Mar 4, 2024

• SynQGen

  Public
  Python package for generating synthetic questions for Information Retrieval

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Feb 1, 2024Feb 1, 2024

• autolens

  Public
  Automated & Augmented ML Toolbox for Image Classification

  Python

  •

  Other

  •3•0•0•0•Updated Dec 5, 2023Dec 5, 2023

• BioASQ_11B

  Public
  biomedical-nlp

  Shell

  •0•0•0•0•Updated Nov 27, 2023Nov 27, 2023

• MedProcNER

  Public
  biomedical-nlp

  Python

  •0•1•0•0•Updated Oct 16, 2023Oct 16, 2023

• xgTaxonomy

  Public
  Python

  •2•1•0•0•Updated Sep 18, 2023Sep 18, 2023

• vpn-idp

  Public
  Authentication in WireGuard VPNs with Identity Providers and OAuth 2.0.

  pythonflaskdjango+ 4oauth2vpnidpwireguard

  Python

  •

  MIT License

  •0•6•0•0•Updated Jul 31, 2023Jul 31, 2023

• GeoDropdown.js

  Public
  Geo Dropdown component for javascript

  JavaScript

  •2•1•2•3•Updated Jul 18, 2023Jul 18, 2023

• ATOM

  Public
  A Calibration Framework using the Atomic Transformations Optimization Method

  0•0•0•0•Updated Apr 27, 2023Apr 27, 2023

• ciberRatoTools

  Public
  0•0•0•0•Updated Apr 21, 2023Apr 21, 2023

• iris_lama_ros

  Public
  LaMa on ROS

  0•0•0•0•Updated Apr 21, 2023Apr 21, 2023

• iris_lama

  Public
  LaMa - A Localization and Mapping library

  0•0•0•0•Updated Apr 21, 2023Apr 21, 2023

• Diseasecard

  Public
  Rare Diseases Portal using COEUS framework

  JavaScript

  •1•7•1•10•Updated Apr 6, 2023Apr 6, 2023

• ArcadeBattle

  Public
  Serious games for hand arthritis rehabilitation

  JavaScript

  •1•1•0•8•Updated Mar 1, 2023Mar 1, 2023