Repositories list

• curator-tool-frontend

  Public
  TypeScript

  •0•0•0•0•Updated Oct 9, 2025Oct 9, 2025

• PathwayBrowser

  Public
  TypeScript

  •0•0•11•0•Updated Oct 9, 2025Oct 9, 2025

• Website

  Public
  Contains the code and configuration for the website

  PHP

  •

  GNU General Public License v2.0

  •2•5•1•0•Updated Oct 1, 2025Oct 1, 2025

• reactome_chatbot

  Public
  This is Reactomes chatbot to its database and search index

  Python

  •

  Apache License 2.0

  •0•3•2•1•Updated Sep 30, 2025Sep 30, 2025

• data-export

  Public
  Creates the files to be placed in the download section

  Java

  •2•2•2•2•Updated Sep 30, 2025Sep 30, 2025

• reaction-exporter

  Public
  Java

  •2•0•0•0•Updated Sep 30, 2025Sep 30, 2025

• graph-core

  Public
  Models the Reactome knowledgebase into a interconnected graph

  Java

  •8•19•2•3•Updated Sep 29, 2025Sep 29, 2025

• literature-databases

  Public
  Other

  •0•0•0•0•Updated Sep 28, 2025Sep 28, 2025

• interaction-exporter

  Public
  Exports molecular interactions inferred from Reactome content

  Java

  •1•5•0•1•Updated Sep 25, 2025Sep 25, 2025

• fireworks-layout

  Public
  Custom radial layout algorithm to visualise Reactome pathways in a space-filling graph

  visualisationradial-layoutpathways+ 2pathways-overviewreactome-pathway

  Java

  •3•1•1•0•Updated Sep 25, 2025Sep 25, 2025

• diagram-converter

  Public
  Generates a set of JSON files to be consumed by the Diagram Viewer

  Java

  •3•1•0•0•Updated Sep 25, 2025Sep 25, 2025

• graph-importer

  Public
  Converts the Reactome knowledgebase into a interconnected graph

  Java

  •4•8•0•0•Updated Sep 25, 2025Sep 25, 2025

• report-logger

  Public
  Centralises different events across various services for periodic report

  Java

  •0•1•0•0•Updated Sep 25, 2025Sep 25, 2025

• experiment-digester

  Public
  Java

  •0•0•0•0•Updated Sep 25, 2025Sep 25, 2025

• analysis-service

  Public
  A RESTful API to access pathway analysis tools

  Java

  •3•4•1•1•Updated Sep 25, 2025Sep 25, 2025

• content-service

  Public
  The new Reactome REST API to access the data

  Java

  •5•11•1•1•Updated Sep 25, 2025Sep 25, 2025

• analysis-report

  Public
  Java

  •

  GNU Affero General Public License v3.0

  •2•1•0•0•Updated Sep 25, 2025Sep 25, 2025

• server-java-utils

  Public
  Server side utilities shared across different projects

  Java

  •

  Apache License 2.0

  •2•0•0•0•Updated Sep 25, 2025Sep 25, 2025

• sbml-exporter

  Public
  Java

  •1•0•0•0•Updated Sep 25, 2025Sep 25, 2025

• interactors-core

  Public
  Java

  •2•0•0•1•Updated Sep 25, 2025Sep 25, 2025

• search-core

  Public
  Java

  •2•1•0•0•Updated Sep 25, 2025Sep 25, 2025

• fireworks-exporter

  Public
  Exports the pathways overview as raster images

  Java

  •

  GNU General Public License v3.0

  •2•0•0•0•Updated Sep 25, 2025Sep 25, 2025

• search-indexer

  Public
  Java

  •3•0•0•1•Updated Sep 25, 2025Sep 25, 2025

• diagram-exporter

  Public
  Exporter of the diagram layout to different formats (pptx, svg, png, gif, jpg, sbgn)

  Java

  •3•1•2•3•Updated Sep 25, 2025Sep 25, 2025

• diagram-reader

  Public
  Java

  •1•0•0•1•Updated Sep 25, 2025Sep 25, 2025

• analysis-core

  Public
  Pathway enrichment and expression analysis as well as species comparison tool

  Java

  •6•3•1•0•Updated Sep 25, 2025Sep 25, 2025

• reactome_galaxy

  Public
  This is for running the analysis service

  Kotlin

  •

  Apache License 2.0

  •0•0•2•1•Updated Sep 24, 2025Sep 24, 2025

• data-content

  Public
  Java

  •2•1•0•0•Updated Sep 23, 2025Sep 23, 2025

• pwp-browser

  Public
  A tool for visualising and interacting with pathways data

  Java

  •7•9•0•1•Updated Sep 18, 2025Sep 18, 2025

• release-msigdb-gsea

  Public
  MSigDB-GSEA data exporter

  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Sep 17, 2025Sep 17, 2025