This package facilitates batch feature extraction and data dashboarding of ABF files. Primarily written for Inoue Lab @ western university. The package is able to output feature arrays and/or raw current traces from the file(s). The module piggy backs off of some of the excellent work found in the pyABF & ipfx packages.

It is recommended to install pyAPIsolation into its own conda environment.
This can be accomplished with the command:
conda create -n pyAPisolation python=3.9 -y
Then install the package:
conda activate pyAPisolation && pip install git+https://github.com/smestern/pyAPisolation

pyAPIsolation uses IPFX on the backend. Occasionally, this install will fail due to strict requirements on the Allen Institute's end.

If this occurs. Run the command: pyAPisolation_setup
Within the environment to force the installation of ipfx.

For Gui usage