Open Source S/R Communications Software for Linux

AMEN (Annotation, Mapping, Expression and Network) is a stand-alone, unified suite of tools to manage, explore and combine biological multifaceted high-throughput data such as annotation, chromosomal location, expression and interaction data.

This is an R package for the Mass spectrometry Research. The MrR can be used to analyze the mass spectrometry data for baseline correction, denoising, peak detection, peak alignment, peak normalization, and biomarker discovery.

WATS is an R package (>R2.15) whose main purpose is to run an individual-based simulation of an acoustically-assisted mark-recapture survey of whales Version 1.0 = for R2.15.x Version 1.01 = for R3.0.3+ For details see: Peel D, Miller BS, Kelly N, Dawson S, Slooten E and Double MC (2014) A simulation study of acoustic-assisted tracking of whales for mark-recapture surveys. PloSOne in press.