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  • yuli9691 Posted 2022-07-15
    I was so tired of trimmomatic not doing what it was supposed to with the adapters, I found that I didn't have enough control with the exact settings for the adapter trimming. I downloaded Bbmap to use Bbduk and had it up and running in about 1 h of playing with the thresholds. Not only it did exactly what I needed ( I needed to cut an adaptors with the ability to specify if it was from the left or the right), but it was easy an intuitive to use.
    Reply from BBMap
    Posted 2022-08-30
    Thanks for giving me my first review! I always like to hear that my tools do exactly what you need, and are intuitive and easy to use. Or, of course, if they aren't, so I can fix them. But I put a lot of effort into making them easy to use, so I'm glad it worked exactly as I intended. Well... sorry about the 1 hour of playing with thresholds, but yep, it can take that to optimize things for a custom case.
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