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# CMake script for Bio++ PhyView
# Author: Julien Dutheil
# Created: 22/08/2009
# Global parameters
CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
PROJECT(bppphyview CXX C)
IF(NOT CMAKE_BUILD_TYPE)
SET(CMAKE_BUILD_TYPE RelWithDebInfo CACHE STRING
"Choose the type of build, options are: None Debug Release RelWithDebInfo MinSizeRel."
FORCE)
ENDIF(NOT CMAKE_BUILD_TYPE)
SET(CMAKE_CXX_FLAGS "-Wall")
IF(NOT NO_VIRTUAL_COV)
SET(NO_VIRTUAL_COV FALSE CACHE BOOL
"Disable covariant return type with virtual inheritance, for compilers that do not support it."
FORCE)
ENDIF(NOT NO_VIRTUAL_COV)
IF(NO_VIRTUAL_COV)
MESSAGE("-- Covariant return with virtual inheritance disabled.")
SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -DNO_VIRTUAL_COV=1")
ENDIF(NO_VIRTUAL_COV)
IF(NOT NO_DEP_CHECK)
SET(NO_DEP_CHECK FALSE CACHE BOOL
"Disable dependencies check for building distribution only."
FORCE)
ENDIF(NOT NO_DEP_CHECK)
IF(NOT DOC_COMPRESS)
SET(DOC_COMPRESS gzip CACHE STRING
"Set program for compressing documentation."
FORCE)
ENDIF(NOT DOC_COMPRESS)
IF(NOT DOC_COMPRESS_EXT)
SET(DOC_COMPRESS_EXT gz CACHE STRING
"Set extension of compressed documentation."
FORCE)
ENDIF(NOT DOC_COMPRESS_EXT)
IF(NO_DEP_CHECK)
MESSAGE("-- Dependencies checking disabled. Only distribution can be built.")
ELSE(NO_DEP_CHECK)
#static linkage?
IF(NOT BUILD_STATIC)
SET(BUILD_STATIC FALSE CACHE BOOL
"Enable static linkage."
FORCE)
ENDIF()
IF(BUILD_STATIC)
MESSAGE("-- Static linkage requested.")
SET(CMAKE_CXX_FLAGS "-static -static-libgcc ${CMAKE_CXX_FLAGS}")
ENDIF()
#build man pages?
IF(NOT DEFINED MAN)
SET(MAN UNIX)
ENDIF(NOT DEFINED MAN)
#find executables for documentation
IF(MAN)
FIND_PROGRAM(NROFF_EXE NAMES nroff)
IF(NROFF_EXE)
MESSAGE("-- Found nroff here: ${NROFF_EXE}")
MESSAGE(" Adding targets: man")
ADD_CUSTOM_TARGET(man
ALL
COMMAND cp phyview.1.txt phyview.1
COMMAND ${DOC_COMPRESS} -f phyview.1
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}/man
)
SET_DIRECTORY_PROPERTIES(PROPERTIES ADDITIONAL_MAKE_CLEAN_FILES man/phyview.1.${DOC_COMPRESS_EXT})
ELSE()
MESSAGE(FATAL_ERROR "Program nroff required but not found.")
ENDIF()
ENDIF(MAN)
#here is a useful function:
MACRO(IMPROVED_FIND_LIBRARY OUTPUT_LIBS lib_name include_to_find)
#start:
FIND_PATH(${lib_name}_INCLUDE_DIR ${include_to_find})
INCLUDE_DIRECTORIES(${${lib_name}_INCLUDE_DIR})
IF(BUILD_STATIC)
SET(${lib_name}_STATIC_NAMES lib${lib_name}.a)
FIND_LIBRARY(${lib_name}_STATIC_LIBRARY NAMES ${${lib_name}_STATIC_NAMES} PATH_SUFFIXES lib${LIB_SUFFIX})
IF(${lib_name}_STATIC_LIBRARY)
MESSAGE("-- Library ${lib_name} found here:")
MESSAGE(" includes: ${${lib_name}_INCLUDE_DIR}")
MESSAGE(" static libraries: ${${lib_name}_STATIC_LIBRARY}")
ELSE()
MESSAGE(FATAL_ERROR "${lib_name} required but not found.")
ENDIF()
#add the dependency:
SET(${OUTPUT_LIBS} ${${OUTPUT_LIBS}} ${${lib_name}_STATIC_LIBRARY})
ELSE()
SET(${lib_name}_NAMES ${lib_name} ${lib_name}.lib ${lib_name}.dll)
FIND_LIBRARY(${lib_name}_LIBRARY NAMES ${${lib_name}_NAMES} PATH_SUFFIXES lib${LIB_SUFFIX})
IF(${lib_name}_LIBRARY)
MESSAGE("-- Library ${lib_name} found here:")
MESSAGE(" includes: ${${lib_name}_INCLUDE_DIR}")
MESSAGE(" dynamic libraries: ${${lib_name}_LIBRARY}")
ELSE()
MESSAGE(FATAL_ERROR "${lib_name} required but not found.")
ENDIF()
#add the dependency:
SET(${OUTPUT_LIBS} ${${OUTPUT_LIBS}} ${${lib_name}_LIBRARY})
ENDIF()
ENDMACRO(IMPROVED_FIND_LIBRARY)
# Set the CMAKE_PREFIX_PATH for the find_library fonction when using non
# standard install location
IF(CMAKE_INSTALL_PREFIX)
SET(CMAKE_PREFIX_PATH "${CMAKE_INSTALL_PREFIX}" ${CMAKE_PREFIX_PATH})
ENDIF(CMAKE_INSTALL_PREFIX)
#Find the libraries. The order is very important for static linkage, it won't
#link if you change it!
IMPROVED_FIND_LIBRARY(LIBS bpp-qt Bpp/Qt/QtGraphicDevice.h)
IMPROVED_FIND_LIBRARY(LIBS bpp-phyl Bpp/Phyl/Tree.h)
IMPROVED_FIND_LIBRARY(LIBS bpp-seq Bpp/Seq/Alphabet/Alphabet.h)
IMPROVED_FIND_LIBRARY(LIBS bpp-core Bpp/Clonable.h)
# Find the Qt installation
FIND_PACKAGE(Qt4 4.4.0 COMPONENTS QtCore QtGui REQUIRED)
INCLUDE(${QT_USE_FILE})
SET(LIBS ${LIBS} ${QT_LIBRARIES})
# Subdirectories
ADD_SUBDIRECTORY(bppPhyView)
ADD_SUBDIRECTORY(man)
ENDIF(NO_DEP_CHECK)
# Packager
SET(CPACK_PACKAGE_NAME "bppphyview")
SET(CPACK_PACKAGE_VENDOR "Bio++ Development Team")
SET(CPACK_PACKAGE_VERSION "0.3.0")
SET(CPACK_PACKAGE_VERSION_MAJOR "0")
SET(CPACK_PACKAGE_VERSION_MINOR "3")
SET(CPACK_PACKAGE_VERSION_PATCH "0")
SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY "The Bio++ Phylogenetic Viewer")
SET(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_SOURCE_DIR}/COPYING.txt")
SET(CPACK_RESOURCE_FILE_AUTHORS "${CMAKE_SOURCE_DIR}/AUTHORS.txt")
SET(CPACK_RESOURCE_FILE_INSTALL "${CMAKE_SOURCE_DIR}/INSTALL.txt")
SET(CPACK_SOURCE_GENERATOR "TGZ")
SET(CPACK_SOURCE_IGNORE_FILES
"CMakeFiles"
"Makefile"
"_CPack_Packages"
"CMakeCache.txt"
".*\\\\.cmake"
".*\\\\.git"
".*\\\\.gz"
".*\\\\.deb"
".*\\\\.rpm"
".*\\\\.dmg"
".*\\\\.sh"
".*\\\\..*\\\\.swp"
".*moc_.*"
"bppPhyView/\\\\..*"
"bppPhyView/phyview"
"man/.*\\\\.1.${DOC_COMPRESS_EXT}"
"debian/tmp"
"debian/bppphyview/"
"debian/bppphyview\\\\.substvars"
"debian/bppphyview\\\\.debhelper"
"debian/debhelper\\\\.log"
"install_manifest.txt"
"DartConfiguration.tcl"
${CPACK_SOURCE_IGNORE_FILES}
)
IF (MACOS)
SET(CPACK_GENERATOR "Bundle")
ENDIF()
SET(CPACK_SOURCE_PACKAGE_FILE_NAME "${CMAKE_PROJECT_NAME}-${CPACK_PACKAGE_VERSION_MAJOR}.${CPACK_PACKAGE_VERSION_MINOR}.${CPACK_PACKAGE_VERSION_PATCH}")
SET(CPACK_DEBSOURCE_PACKAGE_FILE_NAME "${CMAKE_PROJECT_NAME}_${CPACK_PACKAGE_VERSION_MAJOR}.${CPACK_PACKAGE_VERSION_MINOR}.${CPACK_PACKAGE_VERSION_PATCH}.orig")
INCLUDE(CPack)
#This adds the 'dist' target
ADD_CUSTOM_TARGET(dist COMMAND ${CMAKE_MAKE_PROGRAM} package_source)
# 'clean' is not (yet) a first class target. However, we need to clean the directories before building the sources:
IF("${CMAKE_GENERATOR}" MATCHES "Make")
ADD_CUSTOM_TARGET(make_clean
COMMAND ${CMAKE_MAKE_PROGRAM} clean
WORKING_DIRECTORY ${CMAKE_CURRENT_DIR}
)
ADD_DEPENDENCIES(dist make_clean)
ADD_CUSTOM_TARGET(make_clean_man
COMMAND rm -f *.${DOC_COMPRESS_EXT}
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}/man
)
ADD_DEPENDENCIES(dist make_clean_man)
ENDIF()
IF(NOT NO_DEP_CHECK)
IF (UNIX)
#This creates deb packages:
ADD_CUSTOM_TARGET(origdist COMMAND cp ${CPACK_SOURCE_PACKAGE_FILE_NAME}.tar.gz ../${CPACK_DEBSOURCE_PACKAGE_FILE_NAME}.tar.gz)
ADD_DEPENDENCIES(origdist dist)
ADD_CUSTOM_TARGET(deb dpkg-buildpackage -uc -us -i${CPACK_SOURCE_PACKAGE_FILE_NAME}.tar.gz)
ADD_DEPENDENCIES(deb origdist)
ADD_DEPENDENCIES(deb man)
#This creates rpm packages:
ADD_CUSTOM_TARGET(rpm rpmbuild -ta ${CPACK_SOURCE_PACKAGE_FILE_NAME}.tar.gz)
ADD_DEPENDENCIES(rpm dist man)
#ADD_DEPENDENCIES(info install)
ENDIF(UNIX)
ENDIF(NOT NO_DEP_CHECK)
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