In the MenuRefresher we override ImageJ 1.x's Memory & Threads plugin. However this results in skew with the search bar.

I am not sure where the search results are produced.. I think these are LegacySearchActions? But I am not sure how what the run method is actually doing.

I think one option would be to route the search action run method to use the menu command. A more robust option would be to try and push this code to imagej-legacy and go direct bytecode manipulation of the Memory method. It would just need some abstraction to point to the scijava configuration file instead of fiji.cfg explicitly.