import ez_setup

ez_setup.use_setuptools()

import glob

import os

import sys

from setuptools import setup

from distutils.extension import Extension

if 'setuptools.extension' in sys.modules:

m = sys.modules['setuptools.extension']

m.Extension.__dict__ = m._Extension.__dict__

version_py = os.path.join(os.path.dirname(__file__), 'gemini', 'version.py')

version = open(version_py).read().strip().split('=')[-1].replace('"','')

long_description = """

``gemini`` is a database framework for exploring genetic variation'

"""

with open("requirements.txt", "r") as f:

install_requires = [x.strip() for x in f.readlines() if not x.startswith("gemini")]

setup(

name="gemini",

version=version,

install_requires=install_requires,

requires = ['python (>=2.5, <3.0)'],

packages=['gemini',

'gemini.scripts',

'gemini.data'],

author="Aaron Quinlan and Uma Paila",

description='A database framework for exploring genetic variation',

long_description=long_description,

url="http://gemini.readthedocs.org",

package_dir = {'gemini': "gemini"},

package_data = {'gemini': [

'static/css/gemini.css',

'static/img/gemini.png',

'static/third_party/bootstrap/css/*',

'static/third_party/bootstrap/img/*',

'static/third_party/bootstrap/js/*',

'static/third_party/jquery/jquery-1.7.1.js',

'static/third_party/jquery-ui/jquery-ui.min.js',

'views/*'

]},

zip_safe = False,

include_package_data=True,

scripts = ['gemini/scripts/gemini'],

author_email="arq5x@virginia.edu",

classifiers=[

'Development Status :: 4 - Beta',

'Intended Audience :: Science/Research',

'License :: OSI Approved :: GNU General Public License (GPL)',

'Topic :: Scientific/Engineering :: Bio-Informatics']

)