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Commits on Feb 27, 2026

• Merge pull request #58 from andim/patch-graceful-vdist-lookup-warnings

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Commits on Jan 26, 2026

• chore(tests): rename duplicate function name to ensure all tests are run

  yutanagano

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• chore: add docstring to _vdists_lookup helper function for posterity

  yutanagano

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Commits on Jan 23, 2026

• added kwarg to suppress removal of clustering

  andim

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Commits on Dec 5, 2025

• feat(nn): gracefully handle bad TR V genes

  yutanagano

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Commits on Nov 10, 2025

• Merge pull request #56 from andim/fix-tcrdist-nn

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• feat(nn): vdist lookup error now quotes original input rather than the unsuccessful imputation

  yutanagano

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• fix(nn): simplify regex as suggested by Andreas

  yutanagano

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• Merge pull request #57 from andim/update-standardize-tests

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• chore(nn): improve tr gene regex by requiring some symbol instead of matching on empty string as well

  yutanagano

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• chore(test): have 02 allele specifier in tcrdist test

  yutanagano

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• Merge pull request #55 from andim/update-new-nn-tcrdist-docstring

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Commits on Nov 9, 2025

• chore(tests): update standardize_table test to work with tidytcells 2.2's logging warning system

  yutanagano

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• chore(tests): update io standardize tests to work with tidytcells 2.2

  yutanagano

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• feat(nn): add routine to automatically add *01 to V gene symbols in dist lookup

  yutanagano

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• feat(tests): test for V genes that do not have allele specifiers

  yutanagano

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• feat(nn): add value check when looking up V genes

  yutanagano

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• feat(tests): make tcrdist nn tests more rigorous

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Commits on Nov 7, 2025

• docs(nn): update docstring for nn tcrdist function

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Commits on Oct 20, 2025

• Merge pull request #54 from andim/implement-nn-tcrdist-cross

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• fix(tests): ensure tests are asserting

  yutanagano

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• feat(nn): more robust testing of tcrdist nearest neighbors

  yutanagano

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• feat(nn): improve tcrdist-cross to use less memory and prefilter more aggressively

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Commits on Oct 16, 2025

• added information logo capability

  andim

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• make cluster annotations display optional in clustermap

  andim

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Commits on Oct 10, 2025

• fix: incorrect conflict resolutions

  yutanagano

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• fix: typo in new tcrdist cross implementation

  yutanagano

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• feat: implement cross distance functionality in nearest_neighbour_tcrdist

  yutanagano

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• chore: update docstrings

  yutanagano

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• fix: index ordering in symdel output

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Commits on Sep 18, 2025

• bumped version

  andim

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Commits on Jun 26, 2025

• add sceptr based nn search

  andim

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Commits on Nov 28, 2024

• added zenodo doi

  andim

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Commits on Oct 31, 2024

• travis on 3.9 only

  andim

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• update travis to 3.9 and 3.10

  andim

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