Hello, I don't know if this is the proper place to ask this question but I am trying to calculate the free binding energy between an antibody and a pMHC complex (my ligand), and I currently don't have access to schrodingers suite to calculate the most likely protonation states. Is there an alternative way to run the analysis that would not require this (non free) tool ?
Hello, I don't know if this is the proper place to ask this question but I am trying to calculate the free binding energy between an antibody and a pMHC complex (my ligand), and I currently don't have access to schrodingers suite to calculate the most likely protonation states. Is there an alternative way to run the analysis that would not require this (non free) tool ?