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Slowness when opening NIFTI files #417

@Aonnghus

Description

@Aonnghus

I'm experiencing significant delays when trying to open NIFTI files in the .nii.gz format using Fiji.

Steps to Reproduce:

  1. Open Fiji.
  2. Use File > Import > Bio-Formats to select a .nii.gz file.
  3. The message "Identifying .nii.gz" appears, but the application hangs for several minutes before the Bio-Formats import configuration window finally shows up.
  4. Alternatively, using File > Import > Bio-Formats windowless results in the same delay.
  5. Using File > Open... shows "Initializing base reader" in the UI, but again, the application hangs for a long time.

In ImageJ 1, drag-and-drop or File > Open... loads my .nii.gz NIFTI stack within seconds.

  • Fiji version: Fiji-latest
  • ImageJ version: 1.54p
  • Bio-Formats version: 8.3.0
  • OS: Windows 11 64-bit
  • Java version: 21.0.7 64-bit

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