DMRITool is an open souce toolbox for reconstruction, processing and visualization of diffusion MRI data (DWI, tensor, ODF,EAP, fibers etc.).
FRIEND engine is a new implementation of the FRIEND software, a fMRI neurofeedback processing package, already available on the NITRC repository
a simple C++ graph analysis library
Analysis tools for 3D images of the cerebral cortex at submillimetre resolution
Framework to compute average cortical profiles per ROI.
The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration
Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
A specialized image analysis tool for automated detection and analysis of dendritic spines in neuronal images. 2D Span Auto streamlines workflow for neuroscience researchers with intuitive modules for image processing, dendrite extraction, and morphological analysis. The software features multiple denoising and binarization methods, accurate spine
Neuroimaging analysis and visualization suite
A header-only, no-dependency, C++11 library for accessing FreeSurfer neuroimaging file formats.
Perform automatic skull-stripping for neuroimage analysis
Analysis tools for sub-millimetre MRI of the cerebral cortex
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
NeuroInformatics Database
Neuroimaging analysis and visualization suite
The squirrel neuroimaging data sharing library
Advanced Normalization Tools (ANTs)
Multi-platform, free open source software for visualization and image computing.
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